Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2074 ATGGATGGGAGAGAAGCTATGGCATTCTCTGGAGGCCCCGCTTCATATTACATACATAGAGGAAGTATTGCAGGGTCTGGCCCTGGCACACAGACCGGGGGGTTCCAAGCAGGCCCTGGGTTCAGACCTTCGTCAAACGCCGGCATTCCTGCACAGTCAAATATCCGGGGTAGTTCTGTTGGTTCTACATTTTCAGTAGAGCCTTCGCGTAGCAATTTTAGTCCTGGAGTACCTTTGGGCCAGCCTGTGAAAAAGAAAAGAGGGAGGCCCCGTAAATACTGTCCTGATGGTTCAGTTTCTTTGGGACTGTCTCCATTGCCCGTCAGCGCTAACTCTACCCCGGGGTCTAGCACTCCGACCCAGAAACGTAGTAGAGGGCGCCCTCCTGGAAGTGGAAGGAAGCAACAGCTAGCGACTCTAGGTGAATGGATGAACAGTTCAGCAGGACTGGCTTTTGCACCTCATGTTGTCACTATTGGAGCTGGGGAGGACATTGTAGCAAAGTTGTTGTCATTTTCACAGCAGAGACCCAGGGCTCTGTGCATCCTGTCTGGCACTGGGACAGTTTCATCAGTTACTCTGCGTCAGCCTGCTTCTACTGGTATCAGTGTCACATACGAGGGCCGATTCCAAATATTGTGCTTGTCTGGTTCCTACTTGGTTGCTGAAGATGGTGGGGCGCGCGATAGAACTGGTGGCGTGAGTGTTTCCCTTTCTAGTCCTGATGGTCAGGTTATTGGTGGTGGGGTTGCTATGCTAATCGCTGCAAGCCCAGTGCAGGTGGTAGTGTGCAGCTTTGTATATGGAAGCTCTAAGAGCAAGACTAAGCAAGTGACGACTTCTAAGGATGAGAGTTGTGAGCCTCAGCATGATAACGAGTTAGCTTCACCAGGCAGTGCTCCACCGTCTCAGAACTACACCCAATCTACAACAGGCATAGGCATTTGGCCTGCTTCACGCCCACCACACACTGGTATTGACTTGACGCGTGGATGA 996 0.5171 MDGREAMAFSGGPASYYIHRGSIAGSGPGTQTGGFQAGPGFRPSSNAGIPAQSNIRGSSVGSTFSVEPSRSNFSPGVPLGQPVKKKRGRPRKYCPDGSVSLGLSPLPVSANSTPGSSTPTQKRSRGRPPGSGRKQQLATLGEWMNSSAGLAFAPHVVTIGAGEDIVAKLLSFSQQRPRALCILSGTGTVSSVTLRQPASTGISVTYEGRFQILCLSGSYLVAEDGGARDRTGGVSVSLSSPDGQVIGGGVAMLIAASPVQVVVCSFVYGSSKSKTKQVTTSKDESCEPQHDNELASPGSAPPSQNYTQSTTGIGIWPASRPPHTGIDLTRG 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2074 331 MobiDBLite consensus disorder prediction 19 135 - -
Glsi05g2074 331 CDD DUF296 154 266 IPR005175 -
Glsi05g2074 331 Pfam Plants and Prokaryotes Conserved (PCC) domain 154 267 IPR005175 -
Glsi05g2074 331 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 61 300 IPR039605 GO:0003680
Glsi05g2074 331 MobiDBLite consensus disorder prediction 25 39 - -
Glsi05g2074 331 ProSiteProfiles PPC domain profile profile. 146 288 IPR005175 -
Glsi05g2074 331 MobiDBLite consensus disorder prediction 277 331 - -
Glsi05g2074 331 MobiDBLite consensus disorder prediction 296 315 - -
Glsi05g2074 331 MobiDBLite consensus disorder prediction 104 125 - -
Glsi05g2074 331 SUPERFAMILY AF0104/ALDC/Ptd012-like 152 271 - -
Glsi05g2074 331 MobiDBLite consensus disorder prediction 46 76 - -
Glsi05g2074 331 Gene3D - 154 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2074 Glsi-ChrGlsi05 67445934 67448857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2074 1 331 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 50.919 2.89e-107 316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g2074 05 67445934 67448857 Glsi05g2074 05 67445934 67448857 ECH