Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi05g2063 | ATGAGACTATCAGGAGCATATTCAAGGTTATTACGTGGTGGCCTATCTGGAAAAAGTGGACCTCACTCCCTGCCCTTGGCAAGGATTAAGAAGATAATGAAGTACTCCGGGGACGACGTTAAAATGATATCTGGAGACGCTCCGATTGTTTTTGCTAAAGCTTGTGAGCTATTTATCGAGGAACTAGCCAAAAGGTCCTGGACGATTACCATCCAAGGCAAAAGGAGAACTCTGCACAAACAGGACGTCGCCTCCGCCATTATAGCCACTGATATATTCGACTTTTTGATCACTTTGGCTTCCAATTCTGCAGTTAGCCCTCCTATAATGCAAGTGGAATCGCCTTAA | 348 | 0.4483 | MRLSGAYSRLLRGGLSGKSGPHSLPLARIKKIMKYSGDDVKMISGDAPIVFAKACELFIEELAKRSWTITIQGKRRTLHKQDVASAIIATDIFDFLITLASNSAVSPPIMQVESP | 115 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi05g2063 | 115 | Gene3D | Histone, subunit A | 15 | 100 | IPR009072 | GO:0046982 | |
| Glsi05g2063 | 115 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 22 | 100 | - | - | |
| Glsi05g2063 | 115 | FunFam | Nuclear transcription factor Y subunit C | 14 | 101 | - | - | |
| Glsi05g2063 | 115 | SUPERFAMILY | Histone-fold | 17 | 96 | IPR009072 | GO:0046982 | |
| Glsi05g2063 | 115 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 23 | 87 | IPR003958 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi05g2063 | Glsi-ChrGlsi05 | 67387535 | 67387882 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi05g2063 | 22 | 99 | CCAAT-HAP5 Transcription Factor Family | AT1G54830 | 64.103 | 2.50e-31 | 108 |
Transcription factors information