Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2055 ATGCCTCAGGGAAGCCTTGAAGTTCTTCTGGTCAGTGCCAAGAGTCTTGAAAACACCGATTTTCTTAGTAACATGGATCCTTATGTGATCCTCACATGCCGTACTCAGGAGCAGAAAAGCAGTGTTGCATCAGGTAAAGGATCTGATCCGGAGTGGAATGAGAATTTTGTATTCAACTTAACCGAAGGTGTTTCGGAACTCAAATTGAAGATAATGGACAGTGATTGCGGCACCGATGATGATTTTGTGGGAGAAGCAACCATTCCACTAGATGCTTTGTTTACTGAAGGAAGCATCCCAACCACGACATACAATGTTGTCAAGGATGAGGAATATCGTGGGGAGATTAAAATTGGCCTCACTTTTACGCCCGAGGGGTGCCGCGAATATGTAGAGGAGGAAAGCGTAGGTGGATGGAAGGAGTCGGCTTACGGAGATTAA 441 0.4535 MPQGSLEVLLVSAKSLENTDFLSNMDPYVILTCRTQEQKSSVASGKGSDPEWNENFVFNLTEGVSELKLKIMDSDCGTDDDFVGEATIPLDALFTEGSIPTTTYNVVKDEEYRGEIKIGLTFTPEGCREYVEEESVGGWKESAYGD 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2055 146 Gene3D C2 domain 2 125 IPR035892 -
Glsi05g2055 146 PANTHER C2 DOMAIN-CONTAINING 1 124 - -
Glsi05g2055 146 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Glsi05g2055 146 Pfam C2 domain 4 102 IPR000008 -
Glsi05g2055 146 SMART C2_3c 5 102 IPR000008 -
Glsi05g2055 146 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 125 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2055 Glsi-ChrGlsi05 67349313 67351249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2055 4 119 C2H2 Transcription Factor Family AT4G21160 30.172 3.45e-10 55.1