Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2047 ATGGGTAAGGCATCAAAATGGTTTCGCGGTCTTCTCGCTCTAAAAAAGCCTGACTCCTCGTCTCCCAGTCCGACTAGCTCGGCTCCAACACCACCCAAAGACAGACGCAGATGGACCTTCGTCAAATCTTACAGACAAAACGATCACCTCCATGTCACCACTGTCAAACCCGGCGCCCAGGATCCTGACAATCAGGCGATCGCAGTGGCTGAGGAGGCCGTGCCTGCAGCCGCTGTACCCAGAGGCACGTGCGCTGGTGTCGCGGCGGAGGGAACCGGTAATCGTGAAGAATGGGCGGCCGTTAAGATTCAAGCTGCTTTTCGAGGCTGTTTGGCAAGGAGAGCACTGCGAGCATTAAAAGGATTGGTGAAGCTCCAGGCATTGGTGAGAGGTTACATTGAGAGGAAGCGGACAGCCGAGTGGCTGCAAAGAATGCTAGTGCTCTTACGAGCACAGGCACGAGTTCGTGCAGGGCGGGACCAAATTCTGCTGAACTCATCTTCGAGTGTCAAGTCATCGAACGTACATATCCATGGTCCAGTAACGCCACACAAATTTGAAAACCCAATCAGATCCAAGAGCCTGAAGTATGATCAATCATCAATACTCAAGAGAAATGGCTCCAAATCCTATGTCCAGATCAATGGCAATCAAGAGAAATGCTGGAATACAGCAGGTAATTGGGTAGATGAGCAACCATGGAATCGACAAAGATCTTCCATAAGAACTTGTAGTATGGATGATGAAAGAAATGCAAGGATCCAGGAAATCGACTCTACGAAACCGTACTTAACCCCAAAACACAGAAACCTCCTCCACTCCACTAATCATGCCTTGGTCTCTGATCATGATAGTCAGAGTTTGATCACCACAAAGGACTCAACAACTCATCAGTCAGGTCCAAGTCATTCTTTTGAAGTTCAACAATCTTACAGCCTACTAAAAGTCCATGAGGTTGAGGAGAGTCCATTCTGCGCCGCGGACGGTAGTCCTCAAATTTTTTCTGCTTCCTCTAGGGATGGTGGCTGCAAAAGAAGTCCTTTTACTCCTACCAGGAGTGATGGTTCAAGAAGCTATCTAAGTGGTTATTCAGACTACCCAAATTACATGGCTTACACTGAATCTTCCATGGCAAAGGTCAGATCTCTCAGTGCTCCAAAACAGAGGCCTCAGTATGAGAGGTCTAGTTCATCTAATAGGTACTCAATTAATGGATTTGGCGCGTCAAGATTAACTGCACAGAGGGTATCTGCTTTGCATGCAAGCATCACTAGCAAAGCCTATCCGGGTTCTGGTCGTTTGGACAAGCTTGGTATGCCTGCGGGTTATGTCTGTGAGTTCTTCCAAATTCCTAATTCATATGTAACTCTAATCTTGTGGACGATATGTGAATTTTACTGTGATATACTGTCAGAAATGGATGCATTCATCTCACTGTTTATTCTTTTATCTACTTTGACCAAGTCTACACTATACCCAAGCAATAATACTGGACTTAAGCAACCACTAACAAGAGGTGATGTGTTGCATGCAAGAGCAAGACGAATGTCTTATGGTTCTATGGAATCAAGAGTTCTGGTACAGAAAGATAACAAGAGAGTGCGTGTGTAGAAGGGTGCATGGAGACAATTTAAGGTTAGGCATATTGCCGTCCCGAGCGATGACTTGGAGCCTGGAGACGGCGTCCTCGTTGCCAACGATGTTGGTGACCTTGGTGGGTGGGTACTTCTCTGCCCAAGGGAGGTCGTAGGTTTTACTACAGCTGTCATTTGA 1773 0.4681 MGKASKWFRGLLALKKPDSSSPSPTSSAPTPPKDRRRWTFVKSYRQNDHLHVTTVKPGAQDPDNQAIAVAEEAVPAAAVPRGTCAGVAAEGTGNREEWAAVKIQAAFRGCLARRALRALKGLVKLQALVRGYIERKRTAEWLQRMLVLLRAQARVRAGRDQILLNSSSSVKSSNVHIHGPVTPHKFENPIRSKSLKYDQSSILKRNGSKSYVQINGNQEKCWNTAGNWVDEQPWNRQRSSIRTCSMDDERNARIQEIDSTKPYLTPKHRNLLHSTNHALVSDHDSQSLITTKDSTTHQSGPSHSFEVQQSYSLLKVHEVEESPFCAADGSPQIFSASSRDGGCKRSPFTPTRSDGSRSYLSGYSDYPNYMAYTESSMAKVRSLSAPKQRPQYERSSSSNRYSINGFGASRLTAQRVSALHASITSKAYPGSGRLDKLGMPAGYVCEFFQIPNSYVTLILWTICEFYCDILSEMDAFISLFILLSTLTKSTLYPSNNTGLKQPLTRGDVLHARARRMSYGSMESRVLVQKDNKRVRVXKGAWRQFKVRHIAVPSDDLEPGDGVLVANDVGDLGGWVLLCPREVVGFTTAVI 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2047 590 SMART iq_5 95 117 IPR000048 GO:0005515
Glsi05g2047 590 SMART iq_5 118 139 IPR000048 GO:0005515
Glsi05g2047 590 ProSiteProfiles IQ motif profile. 120 145 IPR000048 GO:0005515
Glsi05g2047 590 PANTHER IQ-DOMAIN 5-RELATED 1 402 - -
Glsi05g2047 590 Pfam IQ calmodulin-binding motif 123 137 IPR000048 GO:0005515
Glsi05g2047 590 Pfam IQ calmodulin-binding motif 98 117 IPR000048 GO:0005515
Glsi05g2047 590 Pfam Protein of unknown function (DUF4005) 331 402 IPR025064 -
Glsi05g2047 590 Gene3D - 94 145 - -
Glsi05g2047 590 ProSiteProfiles IQ motif profile. 96 124 IPR000048 GO:0005515
Glsi05g2047 590 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2047 Glsi-ChrGlsi05 67307213 67313597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2047 1 55 IQD Protein Family AT4G23060 43.103 1.62e-06 48.9