Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2040 ATGTTGGCCGGGTGTTCTAGTTCTACATTGCTGTCACCAAGGCATAGATTGAGGAGTGAAGCATCTGCACAGTTTCAAGCCTGCCATTTCCAGCTGCCTTCGATGAGCGCCCAAAGACTGGACTTGCCATGTAGCTTCCCGCGGAAAGATACCTCGCGTTCGCAGCCCTTGAGACCGGTGGGCCTTTCAGTTGAGAAGCCGATCGATTCCAAGACCAGCAGTTGTTCTCTCAAGCAGAACATTCGACTTCCGCCTTTGACAACCCCCACTCAGCCAGCATTTATTGAAAGCAGAAGGGAGATCAAGGATGAGTTTTGGGAGAAAGGTAACAGTTTGAAGAGGCTTGCAGAGCAGGGATCCGTGGATGAGTCTTTCACCAACAGAGCCAAGAGGAAAAGAGGTATCAGCAATTATGGGAAATCCGATGATATTCTGGAAGGAGAAGACACTTTGAGTTTAGGCCCAATAGGTGCTGAGAACTTTTGGTTTCAGCCTAGGTCAGTTCAGAGTTCAGCAGGCCTTAACCCTTCACTTCCTTTTTCTCTGACGTGTTCCGGGGAAGAAGAAAGGGTGTGTTTCGTGCCCGCTGAAGTGGTCTCTGCACCTTTGCCTTTATCGAACAATCCTTGGGTGGAATCCGTTGTGACAAAGATCACAGAACTAGGTGAGAAGGAGGCAGAGGGTAGCCACCGAGCGGTTAAAGAAGCCTCAGTCTCCAATACTTCATCAGAAAGCCAAAGCTTGAGCCTGAGGTTAAATGAGAATGCTTCCGAACGCGAAGTGGGTAACGGGTCAGGGAATCCTTATCCCTACGGAGGCACCGAGGTTGAGACAGGAGAGGAGGATAACCAAGAGGAGAATCGGGGATTCGAGCTAGTCAGCCTACTTACAGCTTGCGTTGATGCTATTAGATCAAAGAATGTCACTGCAATCAATCATTTCATATCGAAATTGGGTGATCTTGCGTCTCCAGAGGGAACCTCTATAAGTCGTCTCTGTGCTTATTTCACCGAATCCTTGGCTGTCAGGGTCACCAGGCTTTGGCCTTATTCTTTTCATGTTACTACACCCAGAGAGCTTGATAGGGTGGACGATGAAACTGGCTCTGCATTAAGGTTTCTGAACCAGGTCAGCCCAATCCCCAAGTTTCTTCATTTCACATCAAATGAGATATTTTTAAGGGCTTTTGAAGGGAAAGACAGGGTACACATTATAGATTTTGACATCAAGCAAGGGCTTCAATGGCCTAGCTTGTTCCAGAGTTTAGCTTCAAGGACTAATCCTCCAAGCCACGTTAGAATCACGGGTATAGGCGAGTCCAAGCAAGAGCTGAATGAAACAGGAGACAGGCTCGCTGGATTTGCTGAGGCATTGAACCTTCCATTTGAGTTTCACCCGGTGGTGGACAGGTTGGAAGATGTGAGGCTTTGGATGCTTCATGTAAAGGAAAACGAAAGTGTGGCTGTGAATTGTGTTTTCCAGCTCCACAAGACACTTTACGATGGGAACGGAGGAGCGCTGAGGGATTTTTTGGGGCTCGTTCGGAGCACAAATCCTATAATTGTTTTAGTGGCAGAGCAAGAGGCAGAGCACAACGAACCCAGATTGGAAACAAGGGTATGCAATTCGTTGAAGTATTACTCTGCTGTGTTTGATTCAATTGACCACTGCCTTCCACTAGAGAGTCCGATGAGGCGTAAGATAGAGGAGATGTACGCTCGGGAGATCAGGAATATCATTGCATGCGAGGGAAGCGACAGGGTGGAGAGGCACGAGAGTTTCGAGAATTGGAGGAAAATGATGGAGGAAGGAGGGTTCCGATGCACGGGAATTAGTGAGAGGGAAAGGATTCAGAGCCAATTGTTGTTGAAGATGTACTCTTGTGAGAATTACAATGTGAAGAAGCAGGAGCAAGAAGAAGCAGCAGCAATAACTCTGGGTTGGCTAGATCAGCCTCTGTATACTGTCTCGGCATGGGCACCAGTGGACGCTGCGGGCACCTCATCCTCTTTTTCACAGCCAAGGTGA 2028 0.4818 MLAGCSSSTLLSPRHRLRSEASAQFQACHFQLPSMSAQRLDLPCSFPRKDTSRSQPLRPVGLSVEKPIDSKTSSCSLKQNIRLPPLTTPTQPAFIESRREIKDEFWEKGNSLKRLAEQGSVDESFTNRAKRKRGISNYGKSDDILEGEDTLSLGPIGAENFWFQPRSVQSSAGLNPSLPFSLTCSGEEERVCFVPAEVVSAPLPLSNNPWVESVVTKITELGEKEAEGSHRAVKEASVSNTSSESQSLSLRLNENASEREVGNGSGNPYPYGGTEVETGEEDNQEENRGFELVSLLTACVDAIRSKNVTAINHFISKLGDLASPEGTSISRLCAYFTESLAVRVTRLWPYSFHVTTPRELDRVDDETGSALRFLNQVSPIPKFLHFTSNEIFLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKENESVAVNCVFQLHKTLYDGNGGALRDFLGLVRSTNPIIVLVAEQEAEHNEPRLETRVCNSLKYYSAVFDSIDHCLPLESPMRRKIEEMYAREIRNIIACEGSDRVERHESFENWRKMMEEGGFRCTGISERERIQSQLLLKMYSCENYNVKKQEQEEAAAITLGWLDQPLYTVSAWAPVDAAGTSSSFSQPR 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2040 675 ProSiteProfiles GRAS family profile. 283 660 IPR005202 -
Glsi05g2040 675 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 241 656 IPR005202 -
Glsi05g2040 675 MobiDBLite consensus disorder prediction 222 286 - -
Glsi05g2040 675 Pfam GRAS domain family 292 659 IPR005202 -
Glsi05g2040 675 MobiDBLite consensus disorder prediction 234 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2040 Glsi-ChrGlsi05 67269714 67271741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2040 1 659 GRAS Transcription Factor Family AT1G63100 56.815 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi05g2040 GRAS 2.3e-126 CL0063