Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2034 ATGATACAATTTCCAACAGTGAAAGATCCATGTGTGAGAATAGAAGCAGACAGGAGCTCTGGAGGGCTTGCAAGCGAGAACAGTGTGCCTAACCTGAAATTAAAACCCCCAAAGTTGCACCTAGCCAGCAGCAGTCCCATTCCATCCAGCAGCATGGCCTCAACATCCTCGAGAAGGCACCCTGTGTATCATGGCATCCGGTGCCGGGGTGGAAAATGGGTGTCCGAAATCCGGGAGCCACGTAAGACTTCCCGCATATGGCTAGGGACATTTCCCACCCCGGAGATGGCAGCGGCCGCCTATGACGTGGCGGCCTTGGCCCTCAAAGGTAACGATGCTGTTCTCAACTTCCCTGACTCTGTGGGGAGTTATCCGGTACCCGCCTCCACATCTCCTGCTGACATTCGTAATGCTGCCACAGCTGCAGCTGCACTAATGAGGCCTCACCCTGAGAGTGAGACCACCCACAATGCATCATCTTTGACCGCCGGAATCACTACTAATGACAACATTTCATCGTCTGAAACAGAATTCATGGACGAGGAAGCCATTTTCGGCATGCCAAGTTTGCTGCTCGACATGGCAGAGGGAATGCTGCTGTCCCCCCCAAGAATGAGTCCTCCACCCACCTCATATAACTCGGCCGATGAAAAATCAGGTGGAGAAAGTTTGTGGAGCTATTATTGA 687 0.5255 MIQFPTVKDPCVRIEADRSSGGLASENSVPNLKLKPPKLHLASSSPIPSSSMASTSSRRHPVYHGIRCRGGKWVSEIREPRKTSRIWLGTFPTPEMAAAAYDVAALALKGNDAVLNFPDSVGSYPVPASTSPADIRNAATAAAALMRPHPESETTHNASSLTAGITTNDNISSSETEFMDEEAIFGMPSLLLDMAEGMLLSPPRMSPPPTSYNSADEKSGGESLWSYY 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2034 228 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 39 227 IPR045277 GO:0003700
Glsi05g2034 228 CDD AP2 63 120 IPR001471 GO:0003700|GO:0006355
Glsi05g2034 228 FunFam Ethylene-responsive transcription factor 2 61 119 - -
Glsi05g2034 228 Pfam AP2 domain 61 110 IPR001471 GO:0003700|GO:0006355
Glsi05g2034 228 SMART rav1_2 62 124 IPR001471 GO:0003700|GO:0006355
Glsi05g2034 228 ProSiteProfiles AP2/ERF domain profile. 51 118 IPR001471 GO:0003700|GO:0006355
Glsi05g2034 228 MobiDBLite consensus disorder prediction 200 228 - -
Glsi05g2034 228 SUPERFAMILY DNA-binding domain 62 120 IPR016177 GO:0003677
Glsi05g2034 228 Gene3D AP2/ERF domain 62 119 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2034 Glsi-ChrGlsi05 67226897 67228775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2034 53 227 AP2-EREBP Transcription Factor Family AT5G52020 54.237 1.05e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi05g2034 AP2 4.7e-10 CL0081