Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2025 ATGACGTCGTCTCAGGAGCACGAGATGGATCACGACGACGATGGAGGAACTTCCGACCTCAGCACCAGTGCCGGCGACGCAGAACGAGACCCTGCTGCCATCACCAGTAACAAGAACAATGGAGTCTCGAAACAGACTATCTTGGACGATACGACGGCTTTCCAAATCTTGCCGTTGAAGGAGGAGCCCATTGATTCGGACCCCCCATCAGAACCGGACCAAAAGACGCAGCCACCCTCGCCTGCTTCGATTGGGGTTGTTCCTGTAGCGATGCAGATGCCAATGCCCCTACCCATTTCCATGCCGGTCACTGCAGCTAGACGCTCGTCCACCAAGGACCGTCACACGAAGGTGGAAGGGCGTGGACGTAGGATCCGAATACCCGCCGCTTGCGCAGCTCGGATCTTTCAGCTGACTCGGGAGTTAGGCCACAAGTCTGATGGCGAAACGGTACGGTGGCTGCTCGAACACGCCGAGCAGCCCATCATCAAGGCCACCGGCACCGGCACCGGCACCGTTCCGGCCATCGCTGTCTCCGTCGGGGGAACCCTGAAAATTCCCACAACGTCTAGCGCCATCAGCAAACCGGATACTGGCCTTCGGAAGAAGCGTAAACGGCCGTCGAACAGCGAGTTTGTGGACGTAAGTGAAGGCGTTTCACAGTCGTCAGGTCTGGCCCCGATTCAATCTGCAGTACCGCAAGGTCTTGTGCCTGTCTGGGCAATGGGTACCACTAATATGATGGTTCCGGCGAACGCCTTTTGGATGATCCCGCCAGCGATGACGAGCCCAGTGGCTGGAGTTACAGGGTCGTCGAACCAGCAACCTCAGATATGGGCTTTATCTCCGACAGTGACCCCCGCATTCAACATGTCGGCGAGACCCTTATCATCTTTGGTGGCAGCAACAAATATCTCGAGTGACGTAAAAGTTTCGCAGGGGGGTTGCAACAATTTGTCAAACTCAGCGGCGGTGAGTACGGGCACGGTTAGACCAAAGGTGGCGAAGGAGTCGACCATGGCAACAAGTGTTAGTTGTAGCGGGGCGACAGGTAGTGGTAGTGGTAGTGGTAGTGGGAGCGTTAGCGGTAGCAAGGCTCAGATGTTGAGGGATTTTTCATTGGAGATTTACGATAAGCGAGAGTTGCATTGGATGGGGCGGTGTGGGAATCAACAATCAGAGGTTCTGTGGGGTCCAACTGCCCCTTCTTCTGCTTTACCCTTGGCCAGACTTCCCCCACTGTGGTTACTTGCTTCAATGGATACCCTCTCAACTGGGTTCGTCTTCCAATTATGGGTCTAA 1302 0.5545 MTSSQEHEMDHDDDGGTSDLSTSAGDAERDPAAITSNKNNGVSKQTILDDTTAFQILPLKEEPIDSDPPSEPDQKTQPPSPASIGVVPVAMQMPMPLPISMPVTAARRSSTKDRHTKVEGRGRRIRIPAACAARIFQLTRELGHKSDGETVRWLLEHAEQPIIKATGTGTGTVPAIAVSVGGTLKIPTTSSAISKPDTGLRKKRKRPSNSEFVDVSEGVSQSSGLAPIQSAVPQGLVPVWAMGTTNMMVPANAFWMIPPAMTSPVAGVTGSSNQQPQIWALSPTVTPAFNMSARPLSSLVAATNISSDVKVSQGGCNNLSNSAAVSTGTVRPKVAKESTMATSVSCSGATGSGSGSGSGSVSGSKAQMLRDFSLEIYDKRELHWMGRCGNQQSEVLWGPTAPSSALPLARLPPLWLLASMDTLSTGFVFQLWV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2025 433 MobiDBLite consensus disorder prediction 1 84 - -
Glsi05g2025 433 MobiDBLite consensus disorder prediction 33 52 - -
Glsi05g2025 433 MobiDBLite consensus disorder prediction 1 17 - -
Glsi05g2025 433 Pfam TCP family transcription factor 110 186 IPR017887 -
Glsi05g2025 433 MobiDBLite consensus disorder prediction 344 364 - -
Glsi05g2025 433 ProSiteProfiles TCP domain profile. 111 165 IPR017887 -
Glsi05g2025 433 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 44 377 IPR005333 GO:0003700
Glsi05g2025 433 MobiDBLite consensus disorder prediction 189 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2025 Glsi-ChrGlsi05 67152876 67154792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2025 107 383 TCP Transcription Factor Family AT2G45680 46.429 2.40e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Glsi05g2025 TCP 1.9e-26 No_clan