Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2010 ATGGCACCTGACGCTCACTTGGCAATTTACAAAGTATGCGACGTTAGGGGTTGTCCTGAAAGTGCAATCTTAGCTGCAATGGACGCTGCCGTCGAGGATGGCGTGGATGTGCTTTCTTTGTCGCTGGGAGGTGGCTCTGCTTCTTTCTTTCAAGATTCAATTGCACTAGGTGCATTTAGTGCAACTCAGCAGGGGATATTTGTCAGTTGCTCAGCTGATAATAGAGGTCCTTCCAACGGTACTTTGTCTAATGAGGCCCCATGGATTCTAACCGTGGGTGCAAGCACCATTGACAGAAAAATTAAAGCAGTAGCGAAGCTTGGAAACGGGGCAGAATATGAAGGGGAATCGGTATTCCAACCAAAAAACTTGCCCTCGAAATTGTTGCCGCTTGTATATGCTGGTGCAAATGGGAATCGGTCCTCTACCTTTTGTGCCTCAAGATCCTTGGAGAACGTAGATGTTAAGGGAAAGGTAGTGCTGTGCGAGTTAGGTGGGGGAATTGCAAGAGTTGCCAAAGGGCAAGAAGTTAAAGATGCCGGGGGCGTCGCCATGATCCTCATGAACAGTGAAATTGAGGACTTCAATCCCTTTGCCGACGTTCACGTTCTTCCTGCTGTACACGTGAATCACTTTGCTGGATTGAGGATCAAAAAGTACATAAATTCAACCTCAAAACCAGTAGCCACAATCTTATTCCAAGGAACTGTAATCGGAAATCCAGTGGCGCCAGCAGTGACTTCATTTTCTTCAAGAGGTCCAAGTATTGCAAGCCCTGGCATTCTAAAACCAGACATAATAGGGCCAGGAATGAACATTCTGGCTGCATGGCCTGTATCTGTTGACAACCATTTACCTCCATTCATGATAATTTCAGGTACCTCCATGTCTTGCCCTCACCTCAGTGGCATTGCTGCTCTGCTGAAGAGCTCCCACCCAGATTGGTCTCCTGCGGCCATTAAGTCAGCAATCATGACCACTGCAAATGGTGTAAATCTCGGAGGCAAGCCTATATTGGACCAAAGTCTTTTACCTGCTGATATATTTGCCACCGGTGCAGGACAAGTCAACCCTTCGAAAGCAAACGATCCGGGGCTTGTTTATGATATCCAACCGGAGGACTACATTCCTTATTTATGTGGTTTGGGTTACACAGACAGGCAAGTTGGAATTATTGTGCAACGGAAATTCAAATGCTCAGATATAAAAAGCATACCGGAAGCACAGCTTAATTATCCCTCATTTTCCATTCAATTGGGGTCTACTTCACAATTTTACACCAGAACGTTGACAAATGTTGGACCCGCAAATTCATCTTACACTCTTATACTTGACGTGCCCTTGGGTGTAGGTATGAGCGTAAACCCTAGTCATATCATATTCACAGGGGTGAACCAGCAGGTTACATATTCGGTCGAGTTTATCCCAGAATCCAAAGAAAGTAGAAGCAACCGTGAGTTTTCTCAGGGCTCCCTTAAGTGGGTGTCTTATAAACACACTGTTAGCATCCCCATATCTGTCATCTTCCAGTGA 1533 0.4573 MAPDAHLAIYKVCDVRGCPESAILAAMDAAVEDGVDVLSLSLGGGSASFFQDSIALGAFSATQQGIFVSCSADNRGPSNGTLSNEAPWILTVGASTIDRKIKAVAKLGNGAEYEGESVFQPKNLPSKLLPLVYAGANGNRSSTFCASRSLENVDVKGKVVLCELGGGIARVAKGQEVKDAGGVAMILMNSEIEDFNPFADVHVLPAVHVNHFAGLRIKKYINSTSKPVATILFQGTVIGNPVAPAVTSFSSRGPSIASPGILKPDIIGPGMNILAAWPVSVDNHLPPFMIISGTSMSCPHLSGIAALLKSSHPDWSPAAIKSAIMTTANGVNLGGKPILDQSLLPADIFATGAGQVNPSKANDPGLVYDIQPEDYIPYLCGLGYTDRQVGIIVQRKFKCSDIKSIPEAQLNYPSFSIQLGSTSQFYTRTLTNVGPANSSYTLILDVPLGVGMSVNPSHIIFTGVNQQVTYSVEFIPESKESRSNREFSQGSLKWVSYKHTVSIPISVIFQ 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2010 510 Pfam Fibronectin type-III domain 409 507 IPR041469 -
Glsi05g2010 510 Gene3D - 379 509 - -
Glsi05g2010 510 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 507 IPR045051 -
Glsi05g2010 510 Pfam PA domain 130 216 IPR003137 -
Glsi05g2010 510 SUPERFAMILY Subtilisin-like 1 366 IPR036852 GO:0004252|GO:0006508
Glsi05g2010 510 CDD PA_subtilisin_like 104 231 - -
Glsi05g2010 510 Gene3D Peptidase S8/S53 domain 1 375 IPR036852 GO:0004252|GO:0006508
Glsi05g2010 510 Pfam Subtilase family 1 330 IPR000209 GO:0006508|GO:0008236
Glsi05g2010 510 SUPERFAMILY PA domain 150 250 IPR046450 -
Glsi05g2010 510 FunFam subtilisin-like protease SBT1.5 98 238 - -
Glsi05g2010 510 Gene3D - 98 238 - -
Glsi05g2010 510 ProSiteProfiles Serine proteases, subtilase domain profile. 1 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2010 Glsi-ChrGlsi05 67058855 67060387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2010 1 510 Subtilisin-like Serine Gene Family AT1G04110 46.300 9.83e-154 456