Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2009 ATGGACCAGAATGGATGGTCAGTCCCTCTTTCAACCCAAGCATTTCAACTCCTCTCTACTGCCTTTGGTTCATTTTGCGGGGGAACCTTGCGTTTTTCAAGTCCTCGTATATCAAGTATTGAGCAAACTGAAGCCATAAAAAATGCTAGTGGGGCTGCAATGATTCTCATTAACAGAGAAACCACAGGATATACTACCGTAGCTAGAAATTATCCTCTTCCAGCAACCCAACCTGATATCATTGGACCTGGAGTGAGACATGTATGGTTGACCATGCAAAAGAAGGTGAATTGTCTGACAGTAAAACAGACAGAGGCTACAGAGCTAAACTATCCTTCCTTCCCTGTATTGTTGGGATTTCGTCCTCAGACTTACACCAGAAGGGTAACTAATGCTGGTCTAGCTGATTCATCTTATGCTGTGGAGGTTGTTCCACCAAGAGGCGTCGTCTTTTCCAAATCGTTAAATGGAAAAGGACGAGGTGAAAATGAAAGAAAGCAAGTGCTGGGCTTGTGGTCTCAAATGTCAAAATCAAATATTCTTGCTCGGACTGAAGTAAAAGGTCCCCTCACTTTGTTGTGCACTATATATACGTGCATGGGATCCCATTCTAAGTCAAGCAATCCAAGCCCAATCGGTTATCTGTTTCTCCTTCTGGCAACGATGAGGCTTGTATTGCTTCTTGGTCTCATTTTCATTCTCAGCGTCTTTCCAACTTCAAAGTCTGATCATCTCACACGCCAGGACCAAAGCAACCTATTGACTTACATTGTTCATGTCAAAAAGCCTCAAGGTGGCGCTTCTCTTCAATCCCAAGAGTTGCATAGCTGGTACCAATCATTTCTGCCGGCTCCCACAAAAACCTCCAACGAGGAGCGCATGCTTTTCTCATATCAAAATGTTGTCTCAGGATTTGCTGTGAAATTGACTGCCGAAGAAGCCAAAGCTCTGCAAGAGAAGGACGATATTGTGTCAGCCCGGCCTGAAAGAACCCTCTCTTTACATACAACTCATACTCCAAGCTTCTTGGGGTTGCAAAAGAAATCAGGATTGTGGAAAGATTCCAATTTTGGTGAAGGCGTCATTATTGGTGTTGTGGACACAGGGATATACCCATTCCATCCTTCCTTCTCTGATGAAGGAATGCTGCCACCGCCAGCAAAATGGAAAGGCCACTGTGAATTTACGGGGCAGCGGACTTGTAACAACAAGCTCATTGGCGCAAGAAGTTTAGTCAAAAACGCAATTGAAGAGCCTCCCTTCGAAAATTTTGCTCACGGAACCCACACCGCCAGTGAAGCCGCTGGAAGATTTTTACAAGATGCCAGTGTTTTTGGCAACGCCAAGGGCACAGCAGTGGGCATGGCACCTAATGCTCATATAGCAATGTACAAAGTCTGCAATGCTCAAGTGGAATGTCCTGAAAGTGCAATATTAGCTGCGATGGACATTGCCATTGAGGATGGTGTAGATGTCCTTTCTCTGTCCCTTGGTTTAGGCTCTCTTCCTTTCTTCGAAGATCCAATTGCATTAGGCGCATTCGCTGCAATTCAGAAGGGAATTTTCGTGAGTTGCTCAGCTGCTAACGCTGGCCCTGCCTACGGTACTCTGTCAAATGAGGCCCCATGGATTCTCACAGTTGGTGCAAGCACCATTGACAGAACAATAAAAGCAACGGCAAAGCTTGGAAATGGAGCAGAATATAATGGGAAGTCGCTATTCGAACCAAAAGATTTTTCTTCGAAATTATTGCCCCTCGTGTATGCGGGTGCAAATGGAAATCAGTCTTCTGCCTTTTGTGCCCCAGGATCCTTGGAGAATGTCGATGTTAAGGGAAAGGTAGTGCTGTGCGAGATAGGTGGAGGAATTTCAAGAATTTCCAAAGGGCAAGAAGTTAAGGATGCTGGTGGAGCCGCCATGATCGTTATGAACGAACAAACCGGTGGCTTCAGTACCTTCTCTGACGCTCACGTTCTCCCAGCAGTTCATGTGAGTTTCGCTGCTGGGTTGTTGATCAAAGATTATATTAATTCAACCTACAAACCAACAGCAACAATCTTATTCAAACAAACTGTAATTGGGGATTCACTTGCTCCTGCGGTTGTTTCCTTTTCATCCAGAGGTCCAAGCCAGGAAAGCCCCGGCATTCTAAAACCAGACATAATTGGGCCAGGAGTGGACATTCTAGCGGCATGGCCTGTATCTATAGACAACAAACTACCGGCATACAACGTGGTTTCTGGTACCTCAATGTCATGTCCTCACCTCAGTGGCGTTGCTGCTCTGCTCAAAAGCGCCCACCCCGAATGGTCCCCGGCAGCCATAAAGTCCGCAATCATGACCACTGCGAATACTGTAAATCTAGGAGGGAAGCCCATACTGGACCAAAGGCTTCTGCCTGCTGACATATTTGCCACAGGTGCAGGCCACGTTAACCCAACGAAAGCAAATGATCCAGGGCTTGTTTATGATATCCAGTCTGACGATTACCTTCCTTATATATGTGGTTTGGGATACTCTGATAGGGAAGTTTCAATTATTGTGCAAAATAAAGTGAGATGCTCGGAGATAAAAAGCATACCAGAAGCACAACTCAATTATCCCTCAATTTCTATCCTACTGGGGTCTACTTCACAGTTGTACACCAGAACCTTGACTAATGTTGGGCCCGCCAAATCGACTTACACCCTGGAACTAGAGGTGCCCCTGGCAGTAGGTATGAGCGTAAACCCTCGTCAGATAACGTTCACAGAGGTGTACCAGAAGGCTACTTACTCGGTCGAGTTTATCCCACAAATCAAAGAAAATAGAGGCAATCATTCGTTTGCTCAGGGTTCCCTCTCATGGGTATCTGAAAAACACACTGCTAGAATCCCCATATCTGTCATTTTCGAGTGA 2898 0.4565 MDQNGWSVPLSTQAFQLLSTAFGSFCGGTLRFSSPRISSIEQTEAIKNASGAAMILINRETTGYTTVARNYPLPATQPDIIGPGVRHVWLTMQKKVNCLTVKQTEATELNYPSFPVLLGFRPQTYTRRVTNAGLADSSYAVEVVPPRGVVFSKSLNGKGRGENERKQVLGLWSQMSKSNILARTEVKGPLTLLCTIYTCMGSHSKSSNPSPIGYLFLLLATMRLVLLLGLIFILSVFPTSKSDHLTRQDQSNLLTYIVHVKKPQGGASLQSQELHSWYQSFLPAPTKTSNEERMLFSYQNVVSGFAVKLTAEEAKALQEKDDIVSARPERTLSLHTTHTPSFLGLQKKSGLWKDSNFGEGVIIGVVDTGIYPFHPSFSDEGMLPPPAKWKGHCEFTGQRTCNNKLIGARSLVKNAIEEPPFENFAHGTHTASEAAGRFLQDASVFGNAKGTAVGMAPNAHIAMYKVCNAQVECPESAILAAMDIAIEDGVDVLSLSLGLGSLPFFEDPIALGAFAAIQKGIFVSCSAANAGPAYGTLSNEAPWILTVGASTIDRTIKATAKLGNGAEYNGKSLFEPKDFSSKLLPLVYAGANGNQSSAFCAPGSLENVDVKGKVVLCEIGGGISRISKGQEVKDAGGAAMIVMNEQTGGFSTFSDAHVLPAVHVSFAAGLLIKDYINSTYKPTATILFKQTVIGDSLAPAVVSFSSRGPSQESPGILKPDIIGPGVDILAAWPVSIDNKLPAYNVVSGTSMSCPHLSGVAALLKSAHPEWSPAAIKSAIMTTANTVNLGGKPILDQRLLPADIFATGAGHVNPTKANDPGLVYDIQSDDYLPYICGLGYSDREVSIIVQNKVRCSEIKSIPEAQLNYPSISILLGSTSQLYTRTLTNVGPAKSTYTLELEVPLAVGMSVNPRQITFTEVYQKATYSVEFIPQIKENRGNHSFAQGSLSWVSEKHTARIPISVIFE 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2009 965 FunFam subtilisin-like protease SBT1.5 553 693 - -
Glsi05g2009 965 Gene3D - 834 963 - -
Glsi05g2009 965 Gene3D - 84 162 - -
Glsi05g2009 965 Pfam PA domain 585 670 IPR003137 -
Glsi05g2009 965 PRINTS Subtilisin serine protease family (S8) signature 747 763 IPR015500 -
Glsi05g2009 965 PRINTS Subtilisin serine protease family (S8) signature 358 377 IPR015500 -
Glsi05g2009 965 PRINTS Subtilisin serine protease family (S8) signature 422 435 IPR015500 -
Glsi05g2009 965 Pfam Peptidase inhibitor I9 255 335 IPR010259 -
Glsi05g2009 965 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 256 962 IPR045051 -
Glsi05g2009 965 SUPERFAMILY PA domain 602 650 IPR046450 -
Glsi05g2009 965 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 239 335 IPR037045 -
Glsi05g2009 965 CDD PA_subtilisin_like 559 686 - -
Glsi05g2009 965 SUPERFAMILY Subtilisin-like 334 821 IPR036852 GO:0004252|GO:0006508
Glsi05g2009 965 Gene3D - 553 693 - -
Glsi05g2009 965 ProSiteProfiles Serine proteases, subtilase domain profile. 342 817 - -
Glsi05g2009 965 CDD Peptidases_S8_3 334 784 IPR034197 -
Glsi05g2009 965 Gene3D Peptidase S8/S53 domain 360 830 IPR036852 GO:0004252|GO:0006508
Glsi05g2009 965 Pfam Fibronectin type-III domain 864 962 IPR041469 -
Glsi05g2009 965 Pfam Subtilase family 358 790 IPR000209 GO:0006508|GO:0008236
Glsi05g2009 965 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 363 374 IPR023827 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2009 Glsi-ChrGlsi05 67050376 67055930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2009 226 965 Subtilisin-like Serine Gene Family AT1G04110 42.967 0.0 590