Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g2005 ATGGAGTTGGTATACATGATCTTATTCCTAATACTTACCTGGACCATAATTCAAGCCCTTCGTTCACTGCCTAGAAAGAGGAGAGAAAACTACAAGCTTCCACCAGGTCCGGTCCCTTTCCCCTTCATCGGAAACCTCCTTGAACTGGGCAAAAAGCCCCACAAGTCGTTAACCAAACTTGGGGCGGTTCATGGCCCAGTCATGGGGTTAAAACTAGGGCGAATAACCACTATAGTCATCTCGTCGGCAGACATGGCCAAAGAAGTCCTCCAAACCCATGATCATGTCTTGTCTAACCGAACCATTCCCGACGCAATGACAGCTCTCAACCACCATGAGTACAGTTTTCCCTTCATGCCCATTACGCCTCGTTGGCGAAACCTAAGGAAAATATGCAACAATTTTTTATTCGCTAAAAAGATTCTTGATGCAAGCCAAGAACGTAGGCGTAAGAAAGTGCAGGAATTCCTGGCTCATGTGCATCAAAGTAGCCTAACTGGTGAAGCAGTTGATATTGGAAGATGTGCCTTCATGACTACTGTAAATCTTTTATCAGACACTCTTTACTCTTTGGATTTGGTTCATTCCGGTACAGTGAGAGAGTTCAAGGAGCTAGAGTCGAATATCATGAAAGAGGTTGGAAGGCCAAACGTGGCGGATTATTTTCCTGTGCTGAAGATGTTTGACCCACAGGGCGTCAGAAGGCGAATGACAGTTTACTTCGGAAACTTACTCAACGTATTTCAAAACTTGGTTAACCATCGGTTGAAGTTGAGACAAGAGACAGGTTCTGTCATTGACCACGACATGTTAGATGCCCTGCTCCGCATTTCTGAAGAAAACAGTCACGACATGGACAAAGCTTGGATTGAACGTTTATTACTGGACGTATTTATCGCCGGGACTGATACAACTACATCTACACTAGAATGGGCAATGGCTGAGCTACTCAAAAACCCGGAAGCTATGTCAAAAGCAAAAGCAGAGCTGGAGCATACCATTGGCAAAGGTAACCCGGTCGAGGAATATGACATGTCCAGACTCCCTTACTTACAAGCAATCATTAAAGAAACCTTCCGCTTGCGTCCGGCGGTTCCATTTTTACTACCTCGGAAAGCCGAGACAGACGTAGAAATCGGTGGGTACACCATCCCCAAGGGAGCACAAGTGCTGGTTAATGTTTGGGCTATTGGCAGGGATCCAAGCATATGGGACAATCCAGTTTTGTTTTCACCGGAGAGGTTCCTGGGGTCAGATATTGATGTCAAAGGCCGAAACTTTGAGCTGACACCATTTGGTGCTGGGCGTCGAATATGTCCTGGCTTGCCGTTGGCAATGAGGATGTTGGTGCCCATGTTGGGCTCCCTCATCAACTCGTTTGACTGGAAGCTTGAAGACGGTATCTCAGCAGACGATATGGATATGGAAGATAAATTTGGGATTACCTTAGAAAAGGCTGAACCCGTGCGAGCAGTTCCAATCAGAGTAAGCAATTAA 1497 0.4603 MELVYMILFLILTWTIIQALRSLPRKRRENYKLPPGPVPFPFIGNLLELGKKPHKSLTKLGAVHGPVMGLKLGRITTIVISSADMAKEVLQTHDHVLSNRTIPDAMTALNHHEYSFPFMPITPRWRNLRKICNNFLFAKKILDASQERRRKKVQEFLAHVHQSSLTGEAVDIGRCAFMTTVNLLSDTLYSLDLVHSGTVREFKELESNIMKEVGRPNVADYFPVLKMFDPQGVRRRMTVYFGNLLNVFQNLVNHRLKLRQETGSVIDHDMLDALLRISEENSHDMDKAWIERLLLDVFIAGTDTTTSTLEWAMAELLKNPEAMSKAKAELEHTIGKGNPVEEYDMSRLPYLQAIIKETFRLRPAVPFLLPRKAETDVEIGGYTIPKGAQVLVNVWAIGRDPSIWDNPVLFSPERFLGSDIDVKGRNFELTPFGAGRRICPGLPLAMRMLVPMLGSLINSFDWKLEDGISADDMDMEDKFGITLEKAEPVRAVPIRVSN 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g2005 498 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 6 495 - -
Glsi05g2005 498 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2005 498 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2005 498 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2005 498 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2005 498 FunFam Cytochrome P450 76C4 25 492 - -
Glsi05g2005 498 CDD CYP76-like 63 493 - -
Glsi05g2005 498 Pfam Cytochrome P450 34 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2005 498 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2005 498 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2005 498 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2005 498 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2005 498 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2005 498 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2005 498 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2005 498 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2005 498 Gene3D Cytochrome P450 18 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2005 498 SUPERFAMILY Cytochrome P450 34 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g2005 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g2005 Glsi-ChrGlsi05 67029470 67031029 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g2005 2 495 Cytochrome P450 AT2G45550 45.600 5.08e-165 475