Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1993 ATGGATCCAATCACAGCACGCGGGCATTCTCTTGCTTCACCCAATTTCCAGCATCAATTTCAGGCTCTACAGCAAAACACAGAAGGAGACCAAAGCGGGAGCAGCAGTGGGCTAAACCTTGCCCAGAAGAGGGAACGCGAAGAAACCAGCAATGACGTGGGAGCCACCGGGGAAGCAGAAATCACAAGAAGGCCAAGGGGAAGACCCGCCGGATCCAAGAACAAACCCAAGCCACCAATAATCATAACCCGGGACAGCGCAAATGCCCTAAAAACACATGTGATGGAGGTAGGGGATGGGTGTGATATCGTAGAGAGCGTGTCCAACTTCGCCAGGCAACGCCAAAGAGGGGTTAGCATTCTGAGCGGGACTGGTACCGTCACCAATATCACCCTCAGGCAACCTACTTCTTCTGGTGCTGTCGTCACTCTTCACGGAAGGTTCGAGATCTTGTCACTGGCTGGGTCCTTTTTGCCACCACCGGCTCCGCCAGCTGCATCTGGTTTGACCATATACTTGGCGGGTGGGCAAGGGCAAGTGGTGGGGGGAAGTGTTGTTGGGACACTAACAGCTTCAGGGCCCGTGGTAATCATGGCGGCTTCCTTTGGCAACGCTGCCTACGAGAGGCTTCCTTTGGAAGAAGAGGAGCCTTCGCTGCCACTGCAAGGAGGACCCTCAATTGGTGATGTAACTGCTCCACTTCTCCATGGTTTGCCTCCTAATCTCCTCAATTCTATACAGATGCCATCGGAGGCATTCTGGGCCACTGGTCGCCCTCCATATTGA 786 0.5407 MDPITARGHSLASPNFQHQFQALQQNTEGDQSGSSSGLNLAQKREREETSNDVGATGEAEITRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVGDGCDIVESVSNFARQRQRGVSILSGTGTVTNITLRQPTSSGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLTASGPVVIMAASFGNAAYERLPLEEEEPSLPLQGGPSIGDVTAPLLHGLPPNLLNSIQMPSEAFWATGRPPY 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1993 261 SUPERFAMILY AF0104/ALDC/Ptd012-like 87 218 - -
Glsi05g1993 261 MobiDBLite consensus disorder prediction 41 67 - -
Glsi05g1993 261 ProSiteProfiles PPC domain profile profile. 87 225 IPR005175 -
Glsi05g1993 261 FunFam AT-hook motif nuclear-localized protein 90 217 - -
Glsi05g1993 261 CDD DUF296 91 158 IPR005175 -
Glsi05g1993 261 MobiDBLite consensus disorder prediction 1 82 - -
Glsi05g1993 261 MobiDBLite consensus disorder prediction 10 40 - -
Glsi05g1993 261 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 25 217 IPR014476 GO:0003680
Glsi05g1993 261 Pfam Plants and Prokaryotes Conserved (PCC) domain 91 203 IPR005175 -
Glsi05g1993 261 Gene3D - 90 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1993 Glsi-ChrGlsi05 66982689 66983474 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1993 24 261 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 56.690 1.98e-81 246