Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1966 ATGTCAAGACTTGGGCTTTCTTTACTGGTGCTGAACCTCGTCATTTACATGTCTGGGTCGGCAGAATCCGCATTTGCCGGACACTCCATCCCAAAATATTTCATCGAGTCCTCATGCAGGGCCACTCGCTACCCTGTTTTGTGTGTTCAAAGTCTCTTGGGCTATGGAAGCGTGATTGCCCAAAGCGAGCGACAACTAGCTATGGCCGCCTTGTCGGTGTGCATATCCAGGACCCGATCATGTGCATCATTTGTGAAGAAGATATCCAAAGTGGGGGGGATTAAGTCTAGGGACCACGGAGTTATACAAGACTGCATACAGAACCTGGGTAATAGTGTGGACCGTCTTAGCCAATCGGTTAGGGAGTTAGGCCACATGGATCACGCAACGGGCGAGGACTTCTTGTGGCACATAAGCAACGTGCAGACTTGGGTTAGTGCTGCTCTCACTGACCAGAACACTTGTCTTGATGGCTTTGCGGGTCCTCGCAAGGATGGAAACGTCATGGCCGCCATTAGGAGCAGCGTCGCCCATGTTACTCAACTCACCAGTAATGCACTTGCATTGGTTAATCGCTTTGCGTCTAGGCACTGA 594 0.5084 MSRLGLSLLVLNLVIYMSGSAESAFAGHSIPKYFIESSCRATRYPVLCVQSLLGYGSVIAQSERQLAMAALSVCISRTRSCASFVKKISKVGGIKSRDHGVIQDCIQNLGNSVDRLSQSVRELGHMDHATGEDFLWHISNVQTWVSAALTDQNTCLDGFAGPRKDGNVMAAIRSSVAHVTQLTSNALALVNRFASRH 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1966 197 Pfam Plant invertase/pectin methylesterase inhibitor 34 189 IPR006501 GO:0004857
Glsi05g1966 197 FunFam Pectin methylesterase inhibitor 1 31 193 - -
Glsi05g1966 197 NCBIfam pectinesterase inhibitor domain 7 191 IPR006501 GO:0004857
Glsi05g1966 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 193 IPR035513 -
Glsi05g1966 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 193 IPR035513 -
Glsi05g1966 197 CDD PMEI-like_3 37 195 - -
Glsi05g1966 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 189 - -
Glsi05g1966 197 SMART PMEI_2 30 189 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1966 Glsi-ChrGlsi05 66790190 66790783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1966 35 190 Carbohydrate Esterase AT3G14310 32.484 5.17e-23 94.0