Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1949 ATGTCTGCTTACAGAGACGAGGATCCCCGTATTCACGGCATCAAAACTAAGATTCGTGTCGTCCCCAATTTTCCCAAACCGGGTATCATGTTCCAAGACATCACTACTCTGTTGCTGGATCCCAAAGCCTTTAAGGACACAATCGATTTGTTCGTTGAGCGATACAAAGGCAAAAATATTTCTGTTGTTGCAGGAGTTGAAGCTCGGGGTTTTATATTTGGTCCTCCCATTGCACTGGCAATAGGAGCCAAGTTTGTACCTTTGAGAAAACCAAAGAAGCTCCCTGGCAAAGTTATTTCTCAAGAGTACATCTTGGAATATGGAAGGGACTGTCTTGAGATGCATGTTGGAGCTGTTGAGGCTGGTGAGCGAGCTTTAGTGGTTGATGATTTGATTGCTACTGGTGGAACGCTGTGTGCAGCTATGGACTTACTAGAACGTGTTGGGGCAGAAGTAGTTGAGTGTGCATGTGTAATTGAATTACCAGAATTAAAGGGTCGTGAGCGGTTGAACGGGAAGCCGTTGTATGTATTGGTCGAGTATTATCAGTGGTGTGGAAATAAAATTTGA 570 0.4421 MSAYRDEDPRIHGIKTKIRVVPNFPKPGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGVEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVEAGERALVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPELKGRERLNGKPLYVLVEYYQWCGNKI 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1949 189 FunFam Adenine phosphoribosyltransferase 1 2 181 - -
Glsi05g1949 189 NCBIfam adenine phosphoribosyltransferase 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Glsi05g1949 189 Pfam Phosphoribosyl transferase domain 50 167 IPR000836 -
Glsi05g1949 189 Gene3D - 2 182 IPR029057 -
Glsi05g1949 189 SUPERFAMILY PRTase-like 13 176 IPR029057 -
Glsi05g1949 189 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Glsi05g1949 189 CDD PRTases_typeI 48 180 IPR000836 -
Glsi05g1949 189 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1949 Glsi-ChrGlsi05 66660382 66664296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1949 1 180 PRT Gene Family AT1G27450 76.111 1.18e-97 279