Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1927 ATGGCTGCCTTCTTGGTGCCGCTGCTTTTGGTTTCCTTCTCCTTAGTCTTTCATGCAGTAACAGTGAGAGTGTCTTGCACAAACTCATCCAGGTGGGTGGGACCCATCGGCCACCGTGTAATCACGGTTGATGTTAACGGTGGTGGGCATTTTCAGTCCGTCCAAGCGGCCGTCAATGCTGTCCCAGACAACAACAGAATGAAGGTCCTCATTCGAATTAGCGCCGGATACTACATAGAGAAGGTGGTGGTGCCGGTGACGAAGCCTTACATAACGTTAGAGGGGGCGGGGAGGGACGTGACGGTGATAGAATGGCACGATAGAGCCAGTGACCCTGGGCCCAATGGACAACAGCTGCGTACTTACAGAACAGCTTCTGTTACTGTGTTTGCCAACTTTTTCTCTGCTAGGAATATTAGTTTCAAGAACACAGCACCAGCACCAATGCCGGGAATGCAGGGATGGCAAGCGGCTGCGTTTCGAATATCTGGGGACAAAGCATACTTCTCAGGTTGTGGGTTCTACGGGGCACAAGACACTCTCTGTGACGACGCTGGCCGCCATTATTTCAAGGAATGCTATATTGAGGGCTCCATAGATTTCATTTTTGGGAATGGCAGGTCCATGTACAAGGATTGCCAGCTGCACTCAATAGCTACCAGATTCGGGTCGATAGCAGCCCACGATAGGAAATACCCAAACGAGAAGACAGGCTTCGCATTCGTACGCTGCACGGTGACGGGTACAGGCCCGCTCTATGTGGGCCGAGCAATGGGCCAGTACTCCAGGATCGTCTACGCTTATACATACTTCGATCACATAGTTGCACATGGCGGTTGGGATGATTGGAACCATGTGGCCAACAAAAACAGGACTGTGTTCTTTGGAGTGTACAAGTGCTGGGGCCCAGGAGCCGAGGCTGTGCGTGGTGTGTCATGGACCCGAGAGCTAGATTTCGAATCCGCCCATCCATTTCTTGCCAAGAGCTTCGTCAATGGGAGACACTGGATCGCACCTTCTGATGCTTAG 1029 0.5199 MAAFLVPLLLVSFSLVFHAVTVRVSCTNSSRWVGPIGHRVITVDVNGGGHFQSVQAAVNAVPDNNRMKVLIRISAGYYIEKVVVPVTKPYITLEGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANFFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCQLHSIATRFGSIAAHDRKYPNEKTGFAFVRCTVTGTGPLYVGRAMGQYSRIVYAYTYFDHIVAHGGWDDWNHVANKNRTVFFGVYKCWGPGAEAVRGVSWTRELDFESAHPFLAKSFVNGRHWIAPSDA 342
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1927 342 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 37 338 - -
Glsi05g1927 342 ProSitePatterns Pectinesterase signature 2. 195 204 IPR033131 -
Glsi05g1927 342 FunFam Pectinesterase 36 339 - -
Glsi05g1927 342 Gene3D - 37 341 IPR012334 -
Glsi05g1927 342 SUPERFAMILY Pectin lyase-like 38 339 IPR011050 -
Glsi05g1927 342 Pfam Pectinesterase 41 333 IPR000070 GO:0030599|GO:0042545
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi05g1927 Glsi-ChrGlsi05 66523593 66524992 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1927 8 342 Carbohydrate Esterase AT5G47500 74.277 0.0 546