Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1922 ATGACGATGGTGGAGATGTTAAAGGAGGGAATGGCTGAAGATTTTGCCATTATCGCAGGGTTGATAGCGGCGCAATTTGTCTTTGCCGGCCTCGCTGTTTTGCTCAAATATCTTATGTCTCTGGGTCTCCCCTTTCTTACCATTGTCATTTTCACTTCCATGGCTACGTTCCTCATTCTCTTCCCCGTTGCCTTCTATTTTGAAAGGACTAAATGGCCCAAGAAATTTGCTTTGAAATTGATTATACAGCTGTTATTGCTTTCCTTTGGAGGGGTAACTTTGTTCCAGTCCTTCTTCCTTAAAGGAATGAATCTAACTTCACCAACAATGGGAACTGCCATGCCAAACCTTGCCCCAGGTCTCATCTTCATCATCGCATGGACTTTCAGGTTAGAGAAAATCAACTTAAGATGCATGTATAGTAAAGTGAAAATCTTAGGCACATTGCTGTGCGTGGTAGGCGCTGTCACAATGAGCATAATGCAGAGCATTTGCTCTCCTGCGACCAAGACAGAGGCTGAAGTTCAGTTGTTATGGGCCCAATCAGATGTTATATTTGACATGCACAAGATAACTGGTTGTCTTTATCTCATGGCTGCAGTTTTCATATCATCAAGCACTATTGTCCTGCAGGCTTTTACCTTAGGAGACTTTCCTGCACCAATCTCCCTGGGCGCAATGACATCCTTATTTGGAGCTTTCATGACTGCAATTGCTCAATTACTTGAAGATCACAAATTGAAAACTGGGTGGCCACTTGTCCGTGTTGCAGACCTAATTGGCTATTCTGTTATGATAAATGCACAGGGAGGTGCGGCGAGTGGATTATGTCTAGGCTTCAACGGATGGGCACTTAAGAAGAAAGGGCCAGTCTTGGTCTCCATTTTTAGCCCAATTGGTACAGTCTGCTCCATCGTTTTCTCAGTTGTAACGTTTGGAGACACCGTAAATATTGGAAGCCTTGCGGGTATGTTCCTCATGTTCACGGGGCTCTATTTTGTACTTTGGGCTAAAGGGAAAGAAGGGTTCGGGGATGGGGATGGTGGTGATGGCTTAGAGAGAGAGTTCGATGCAGAGAAGCCTCTCTTAAGTTGA 1095 0.4457 MTMVEMLKEGMAEDFAIIAGLIAAQFVFAGLAVLLKYLMSLGLPFLTIVIFTSMATFLILFPVAFYFERTKWPKKFALKLIIQLLLLSFGGVTLFQSFFLKGMNLTSPTMGTAMPNLAPGLIFIIAWTFRLEKINLRCMYSKVKILGTLLCVVGAVTMSIMQSICSPATKTEAEVQLLWAQSDVIFDMHKITGCLYLMAAVFISSSTIVLQAFTLGDFPAPISLGAMTSLFGAFMTAIAQLLEDHKLKTGWPLVRVADLIGYSVMINAQGGAASGLCLGFNGWALKKKGPVLVSIFSPIGTVCSIVFSVVTFGDTVNIGSLAGMFLMFTGLYFVLWAKGKEGFGDGDGGDGLEREFDAEKPLLS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1922 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 264 339 - -
Glsi05g1922 364 PANTHER WAT1-RELATED PROTEIN 19 341 IPR030184 GO:0016020|GO:0022857
Glsi05g1922 364 Pfam EamA-like transporter family 20 159 IPR000620 GO:0016020
Glsi05g1922 364 Pfam EamA-like transporter family 192 335 IPR000620 GO:0016020
Glsi05g1922 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 57 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1922 Glsi-ChrGlsi05 66493684 66496021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1922 5 345 Nodulin-like Gene Family AT5G47470 54.971 2.59e-128 371