Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1906 ATGGGTAGTCTCACTCTCCTCCTTCTATCTCCTGTTCTTAATGCCAATGCTTTACCATTAGGTTTGATAGGTTCATCATCACGTTTGGCTGTTGTGGTAAATATAGGTGCCTACAAGTATGTGTCAGAGCTTTGGCGCAAGAAGCAGTCTGATGTCATGAGATTCTTGCAGAGAGTGAGGTGCTGGGAGTATCGTCAGCAACCTTCCATTGTCCGCCTGACTAGGCCTACTCGTCCTGACAAGGCTCGTCGCTTGGGTTACAAGGCTAAGCAGGGTTATGTTGTTTACCGTGTCCGTGTTCGGAGGGGTGGCAGGAAGAGACCAGTTCCCAAAGGTATTGTATATGGAAAGCCCACAAATCAAGGTGTTACTCAACTGAAATTTCAGCGGAGCAAGAGGTCAGTGGCTGAGGAGCGAGCTGGACGGAAGCTAGGTGGCCTTAGGGTCCTTAATTCTTATTGGGTGAATGAGGACTCGACGTACAAGTATTTTGAGATAATTCTGGTCGATGTTGCCCACAATGCTATCAGAAATGATCCAAGAATTAATTGGCTCTGCAATCCTGTCCAAAAACACAGGGAACTTCGTGGACTCACTTCAGCTGGGAAAAAATACAGGGGCTTACGGGGAAGAGGACATCTGTACCACAAAGCACGTCCATCCCGCAGGGCAACCTGGAAGAGAAACAACACTCTTTCCCTTCGTCGCTACCGCTGA 717 0.4826 MGSLTLLLLSPVLNANALPLGLIGSSSRLAVVVNIGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEIILVDVAHNAIRNDPRINWLCNPVQKHRELRGLTSAGKKYRGLRGRGHLYHKARPSRRATWKRNNTLSLRRYR 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1906 238 PANTHER RIBOSOMAL PROTEIN L15 36 238 IPR000439 GO:0003735|GO:0005840|GO:0006412
Glsi05g1906 238 SMART Ribosomal_L15e_2 36 227 IPR000439 GO:0003735|GO:0005840|GO:0006412
Glsi05g1906 238 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 36 229 IPR012678 GO:0003735|GO:0005840|GO:0006412
Glsi05g1906 238 Pfam Ribosomal L15 36 224 IPR000439 GO:0003735|GO:0005840|GO:0006412
Glsi05g1906 238 ProSitePatterns Ribosomal protein L15e signature. 80 103 IPR020925 GO:0003735|GO:0005840|GO:0006412
Glsi05g1906 238 FunFam Ribosomal protein L15 35 238 - -
Glsi05g1906 238 Gene3D Ribosomal protein l15e 35 238 IPR024794 GO:0003735|GO:0005840
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1906 Glsi-ChrGlsi05 66363658 66366035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1906 35 238 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 91.176 7.48e-126 353