Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1900 ATGGAAAGAAAATTTTTTCCCCAAGCAAGGGTAGATGTGTGGACTCAGGACCTTTCAGGCCCCTATGACGAAGCAACGTACCCACCAATCCACCATAGTTTACACTCCCTTTCATTCTCACATTCTCGTAAACAAACTCTCTCTCCCATGGCATCCAAGCATGATGGATCAACTAAGATACTATCGAACAGAGGAGGACGGGGCAAAGAGGTGGAAGACTATTGCAGTCAAATGAGGCGGTCTTTGATTGCTGGGAGGATTCCAGGACGAACGGACAGTGAAATTAAGAATTACTGGAATTCTCATTTGTGCAAGAAAGTTAATTACAAAGAGGAAAACCCAGAAACGCCAAGGGCACCAGAAACTACGCCCCTGAATACCTGGTACAGTGTTCTAGCTGAGCATGAGGAGGCCGATGGGAGCGGGAACTCAGATATTAGCTTTGATGTCAATGAGTTCTTCGACTTCTCCACTGAAGGAAGTATGGAACATATGCGTGAACAAGTATCTACAACCTGA 519 0.4547 MERKFFPQARVDVWTQDLSGPYDEATYPPIHHSLHSLSFSHSRKQTLSPMASKHDGSTKILSNRGGRGKEVEDYCSQMRRSLIAGRIPGRTDSEIKNYWNSHLCKKVNYKEENPETPRAPETTPLNTWYSVLAEHEEADGSGNSDISFDVNEFFDFSTEGSMEHMREQVSTT 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1900 172 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 107 IPR017930 -
Glsi05g1900 172 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 79 130 - -
Glsi05g1900 172 CDD SANT 81 103 IPR001005 -
Glsi05g1900 172 Gene3D - 69 124 - -
Glsi05g1900 172 MobiDBLite consensus disorder prediction 41 59 - -
Glsi05g1900 172 SUPERFAMILY Homeodomain-like 81 112 IPR009057 -
Glsi05g1900 172 MobiDBLite consensus disorder prediction 41 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1900 Glsi-ChrGlsi05 66328519 66330010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1900 63 149 MYB Transcription Factor Family AT5G40330 37.755 7.29e-12 59.7