Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1883 ATGTTTGGGCTTGGAATCTTTCATTCGGGTATAGAAGTGCATGGTATGGAATATGGCTTTGGAGCTCATGAGTACCCAACCAGTGGTATCTTTGAGGTAGAGCCTAGAAGCTGCCCTGGCTTCATCTTCAGGCGATCAGTGTTTTTGGGCACCACCAATATGTCACATTCAGAATTTCGTTCTTTCATGGAGAGTCTAGCCAGGAATTATCACGGAGACACTTACCATCTGATTGCCAAGAATTGTAACCATTTTTCTGATGAAGTCTGCCAACAACTAACTGGAAAGCCTATACCTGCATGGGTAAATCGGCTGGCTCGTGTAGGTTCTTTCTGCAATTGTCTTCTGCCAGAAAGCCTTCAGGTTGCTGCGGTTGGACATATTCCCGAACGTTTTGCATATTCTGATGATGAGGGATCAAACTCTGGTGGGCAGTCGTCATCCGAAGAGAGTGAAGAGGAGGAGCCAGATCAGCATCTGTTGAGTGTACCTAATGGTGACGTTGCCTTTCTAAAGGAAAAACCAGTGCGGCTTGCACGGGAACTCTTATGA 552 0.462 MFGLGIFHSGIEVHGMEYGFGAHEYPTSGIFEVEPRSCPGFIFRRSVFLGTTNMSHSEFRSFMESLARNYHGDTYHLIAKNCNHFSDEVCQQLTGKPIPAWVNRLARVGSFCNCLLPESLQVAAVGHIPERFAYSDDEGSNSGGQSSSEESEEEEPDQHLLSVPNGDVAFLKEKPVRLARELL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1883 183 Gene3D PPPDE domains 1 128 IPR042266 -
Glsi05g1883 183 SMART DUF862_2a 1 121 IPR008580 GO:0008233
Glsi05g1883 183 PANTHER DESUMOYLATING ISOPEPTIDASE 2 153 IPR008580 GO:0008233
Glsi05g1883 183 ProSiteProfiles PPPDE domain profile. 1 120 IPR008580 GO:0008233
Glsi05g1883 183 MobiDBLite consensus disorder prediction 133 165 - -
Glsi05g1883 183 Pfam PPPDE putative peptidase domain 3 118 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1883 Glsi-ChrGlsi05 66243163 66248370 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1883 05 66243163 66248370 Glsi09g0216 09 1616000 1621109 CCT