Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1872 ATGACTACAATCGAAGCAAGCGCCTCTGCTAAGAGATGGCTTCCTCTTGAAGCTAATCCTGATGTGATGAACCAGTTCCTTTGGGGTCTAGGCCTTCCAGAGGTGGACGCAGAGTGCTATGATGTGTATGGTTTAGATGAAGAACTTTTGGAAATGGTTCCCAAGCCTGTACTTGCCGTGCTTTTTCTTTATCCCATAACCTTAAAGAGTGAAGAAGAGAGGTTGCAACAGGAAAATGAAAAAAGGGAGCATAGCACTAGAGTGTATTTTATGAAGCAAACTGTGGGAAATGCTTGTGGTACCATAGGACTTCTTCATGCCCTTGGAAACATAACTTCTGAGGTCAAGCTTATTGAGGGATCATTCTTTGATAGATTCTTTAAATCTACTGCAAGCATGGATCCATTACAGCGGGCGGCATTTCTTGAGAACGACAGAGAAATGGAAGTTGCTCATTCAGTAGCAGCCATTGCTGGTGATACAGTGGCATCAGACAATGTGGATACTCATTTCATCTGCTTTTCCTGTGTGGATGGTGAACTTTATGAGCTTGACGGAAGAAAGTCAGGACCTATAGTTCATGGTTCATCCTCACCAAGTACTTTGTTGAGGGATGCAGCTAAAGTCATACACAGTATGATCCAGAAAAATCCGAACTCCATCAACTTCAATGTCATTGCCATTTCAAAGAAGTCCGCAGGTGGATATTAA 711 0.4276 MTTIEASASAKRWLPLEANPDVMNQFLWGLGLPEVDAECYDVYGLDEELLEMVPKPVLAVLFLYPITLKSEEERLQQENEKREHSTRVYFMKQTVGNACGTIGLLHALGNITSEVKLIEGSFFDRFFKSTASMDPLQRAAFLENDREMEVAHSVAAIAGDTVASDNVDTHFICFSCVDGELYELDGRKSGPIVHGSSSPSTLLRDAAKVIHSMIQKNPNSINFNVIAISKKSAGGY 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1872 236 Gene3D - 7 231 IPR036959 GO:0004843|GO:0006511
Glsi05g1872 236 CDD Peptidase_C12_UCH_L1_L3 13 228 - -
Glsi05g1872 236 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 11 231 IPR001578 GO:0004843|GO:0006511
Glsi05g1872 236 SUPERFAMILY Cysteine proteinases 11 230 IPR038765 -
Glsi05g1872 236 Coils Coil 68 88 - -
Glsi05g1872 236 Pfam Ubiquitin carboxyl-terminal hydrolase, family 1 13 214 IPR001578 GO:0004843|GO:0006511
Glsi05g1872 236 FunFam Ubiquitin carboxyl-terminal hydrolase 7 231 - -
Glsi05g1872 236 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 165 176 IPR001578 GO:0004843|GO:0006511
Glsi05g1872 236 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 15 32 IPR001578 GO:0004843|GO:0006511
Glsi05g1872 236 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 53 65 IPR001578 GO:0004843|GO:0006511
Glsi05g1872 236 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 93 110 IPR001578 GO:0004843|GO:0006511
Glsi05g1872 236 PRINTS Ubiquitin C-terminal hydrolase (C12) family signature 181 191 IPR001578 GO:0004843|GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1872 Glsi-ChrGlsi05 66215797 66219372 Dispersed/Wgd