Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1867 ATGGAGTTTGCCAAAGTGGAGGCTTTAAAATTTGAATTTTATTTTATGTCTGACCGAGCTTCCCTCTTCTTGACATCGATTGGTTTGCTCAGGTACAAGATGCCAAAAATGATAACCAAGATTGAAGGTAGAGGAAATGGCATAAGGACTAATGCTGTTAGCATGGTTAATATTGCAAAGACCTTGGCTAGACCTGTAGTTTACACTACAAAGTATTTTGGTTGTGAGCTTGGAGCCCACTCAAAATTTGATGGAGGGTTACAAATGTTTTTGTTGCATGCTTTAGAATCTTTTTGTGGGAAAGTAAGTAGAGAGGCAGTGAAGGAGGCTGCATTAATCTTGAAGGAGCTTTATGATTGTGATATGTTGGTGGAGGAGTCTATACTTCAATGGTATGGTATTGGCAAGGCTCGGTTAGCAGCAACAAGAGTTCACAAATCTGGAAGGATGTCAAACCCTTCATTGAATGGCTTGAAAATGCTGAGTTTGAATCTGAGAAAAAATAAACAGACTATTACTTTTCTGTCATGTTCTGTTTGCCATATTTGCTAA 552 0.3841 MEFAKVEALKFEFYFMSDRASLFLTSIGLLRYKMPKMITKIEGRGNGIRTNAVSMVNIAKTLARPVVYTTKYFGCELGAHSKFDGGLQMFLLHALESFCGKVSREAVKEAALILKELYDCDMLVEESILQWYGIGKARLAATRVHKSGRMSNPSLNGLKMLSLNLRKNKQTITFLSCSVCHIC 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1867 183 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 29 88 IPR016189 GO:0003743|GO:0006413
Glsi05g1867 183 Pfam Domain found in IF2B/IF5 31 91 IPR002735 GO:0003743|GO:0006413
Glsi05g1867 183 SUPERFAMILY ARM repeat 83 131 IPR016024 -
Glsi05g1867 183 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 31 85 IPR045196 GO:0003743|GO:0006413
Glsi05g1867 183 ProSiteProfiles W2 domain profile. 10 183 IPR003307 GO:0005515
Glsi05g1867 183 Pfam eIF4-gamma/eIF5/eIF2-epsilon 88 138 IPR003307 GO:0005515
Glsi05g1867 183 Gene3D - 28 97 - -
Glsi05g1867 183 SMART eIF2Bneu4 29 123 IPR002735 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1867 Glsi-ChrGlsi05 66190029 66191373 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1867 31 84 Eukaryotic Initiation Factors Gene Family AT1G36730 79.630 7.04e-26 100