Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1851 ATGGAACTTCATTCTAAACACCAACTTGGCCTTTTTTGTGTCATGCTGCTCTTACCTGCACTGTGTACTGCCTTTGACTATTTTACGCCCTCCAGAGCAACCTATTACGGTAGCCCAGATTGCTATGGAACTCGAAGGGGAGCTTGTGGGTTTGGCGAATATGGAAGGACTGTCAACGATGGCAGCGTTGCAGGCGTGTCTAGGCTATGGAGGAATGGATCTGGATGTGGGGCTTGTTACCAGGTTAGGTGTAAAAATCCACGATACTGCGATGACTATGGAGCACACGTAGTGGTCACAGACTATGGTGAAGGAGACAGAACAGACTTCATCATGAATCCCCGTGCCTACTCGAAACTGGGACGTAATCCAGATGCATCTACAGAGCTATTCAAACATGGTGTCGTGGACGTAGAATTCAGAAGGATGCCCTGCAGATATGCTGGCTATAACATCTTGTTCAAGGTCCATGAGGAAAGCAAATACCCTGATTACATAGCTATAGCCATTCTCTACGTAGCTGGACAATACGACGTCACTGCTGTCCAGACGTGGCAGGAAGACTGCCAAGAATGGAGGCATATGCGAAGAGCCTTCGGTGGAGTTTTTGACACTGCTAGTCCACCAAGTGGAGAAATCAACTTGAGGTTCCAAGTGACTAGCAGTGCAGGGGTTTATTGGGTGAAGTCCAAGAGTGCTATCCCTAGTGATTGGAAGGCCGGAGCTTCTTATGACTCCCAGGTTCAGCTAAATTGA 756 0.4802 MELHSKHQLGLFCVMLLLPALCTAFDYFTPSRATYYGSPDCYGTRRGACGFGEYGRTVNDGSVAGVSRLWRNGSGCGACYQVRCKNPRYCDDYGAHVVVTDYGEGDRTDFIMNPRAYSKLGRNPDASTELFKHGVVDVEFRRMPCRYAGYNILFKVHEESKYPDYIAIAILYVAGQYDVTAVQTWQEDCQEWRHMRRAFGGVFDTASPPSGEINLRFQVTSSAGVYWVKSKSAIPSDWKAGASYDSQVQLN 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1851 251 Gene3D - 146 247 IPR036749 -
Glsi05g1851 251 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 246 IPR007117 -
Glsi05g1851 251 Gene3D - 21 145 IPR036908 -
Glsi05g1851 251 SUPERFAMILY Barwin-like endoglucanases 13 149 IPR036908 -
Glsi05g1851 251 CDD DPBB_EXLB_N 31 145 - -
Glsi05g1851 251 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 150 IPR007112 -
Glsi05g1851 251 PANTHER EXPANSIN-B3 18 249 - -
Glsi05g1851 251 Pfam Lytic transglycolase 63 140 IPR009009 -
Glsi05g1851 251 Pfam Expansin C-terminal domain 152 235 IPR007117 -
Glsi05g1851 251 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Glsi05g1851 251 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576
Glsi05g1851 251 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Glsi05g1851 251 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Glsi05g1851 251 SUPERFAMILY PHL pollen allergen 151 246 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1851 Glsi-ChrGlsi05 66089215 66090472 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1851 4 250 Expansin Gene Family AT4G17030 57.430 1.36e-105 304