LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi05g1839	ATGGCTAACATCCAAAGAGCAACCAACAGCATGACAATCTTGTCAAGCTATTTCCATTCCCTCTCCCAAACTCCTCAAAGGCTTAGAAAAAGAATGCTAGCCACTTGGACCCCAGACCAGGAACTCAACCAAGTGAGGCACAGGTCTGGGGCAGACATGAAGAGGAAGCTCCAGTGGTATGATCTGGTAGCTCTTGGAGTAGGAGGAATGCTTGGTGCTGGAGTGTTTGTCACAACTGGTTCTGTAGCCCTTCAACACTCTGGTTCCTCAGTTTTTATATCCTATATTATAGCCGGAATATCAGCCCTTCTCTCCTCTCTGTGTTATACTGAGTTTTCGGTTCAAGTCCCAGTTGCAGGAGGAGCTTTTAGTTATTTAAGATTAACTTTTGGAGAATTTGTGGGATATTTTGCTGGGGCAAATATACTAATGGAGTATGTATTATCCAACGCTGCAGTAGCAAGGAATTTTACAGAGTATTTGAGCTGTGCATTTGGAAAAAATGATCCAGGTGTGTGGAGAGTGGAAGTACAAGGATTGCCAGAGAACTATAACATGTTGGATTTTCCAGCTGTGGCTATTATCCTTCTTCTCACTCTATGCTTATGTCATAGTACAAAGGAAAGCTCTATACTGAACTTCATTATGACAGTCTTCCATGTGATTTTCTTTGGATTTATCATAGTCGCTGGTTTCTATAATGGAAGTGCCAAAAACTTGGTTAGTCCCAAAGGACTAGCACCTTTTGGTGTTAGAGGTGTTCTTGATGGAGCGGCTATAGTCTACTTCAGCTATATAGGCTATGACTCAGCTTCAACCATGGCCGAGGAGATAAAAAATCCTTCTAAGAGCCTGCCTATTGGCATTGTTGGTTCAGTTCTTATAACCACTGTGCTTTATTGCTTAATGGCTCTGTCTTTGTGTGTGATGGTTCCTTACAACGAGATTTCGGAGAAAGCATCATTTTCAGTCGCTTTCCTTAAGATTGGTTGGAAGTGGGCCAGCAACCTTGTTGGGGCTGGTGCCAGTTTGGGTATAGTTGCTTCTCTGTTGGTTGCCATGTTAGGCCAAGCGAGATACCTTTGTGTTCTTGGAAGGGCACGGCTGGTGCCATCCTGGTTAGCCAAAGTACATCCTTCAACAGGCACCCCATTGAATGCCACACTCTTTCTGGGAATTTGCACAGCATCTATTGCGCTCTTCACGGAGCTTGACATAATTATTCAGCTGGTCAGTATCGGCACTCTGATAGTGTTCTACCTGGTGGCCAATGCTCTTATATACCGCCGATATGTGATCACTAGCCATACCCCACCTTTGCACACTCTCTTGTTTCTCTTTCTCCTCTCTCTGAGTGCACTTGGCTTCTCCATATCTTGGAAATTCAAGCATCAATGGTGGGGTCTGCCAATTTTTGGTGGGTTCACGATCGCCATCACAGCCTTGTTCCAATACATGGTCCCTAGCCTTTCCCAAGATGCTGATTGGTCTGTGCCATTTATGCCGTGGCCAGCTGCCATCTCCATCTTTCTTAACATTTTCCTAATGACTACACTCAAAATCCTCTCCTTCCAAAGGTTTGCAATATGGTCATGCCTCATTTCTATCTTTTATGTGCTCTATGGCGTTCACTCCACCTATCAAGCAGAGGAGATTGAGATGGGAGTTCATGAAGTCAATTCGAGCATATCCAATTTACAAGCTAAGGTAGAAATGCAAGTGCTTTAG	1728	0.441	MANIQRATNSMTILSSYFHSLSQTPQRLRKRMLATWTPDQELNQVRHRSGADMKRKLQWYDLVALGVGGMLGAGVFVTTGSVALQHSGSSVFISYIIAGISALLSSLCYTEFSVQVPVAGGAFSYLRLTFGEFVGYFAGANILMEYVLSNAAVARNFTEYLSCAFGKNDPGVWRVEVQGLPENYNMLDFPAVAIILLLTLCLCHSTKESSILNFIMTVFHVIFFGFIIVAGFYNGSAKNLVSPKGLAPFGVRGVLDGAAIVYFSYIGYDSASTMAEEIKNPSKSLPIGIVGSVLITTVLYCLMALSLCVMVPYNEISEKASFSVAFLKIGWKWASNLVGAGASLGIVASLLVAMLGQARYLCVLGRARLVPSWLAKVHPSTGTPLNATLFLGICTASIALFTELDIIIQLVSIGTLIVFYLVANALIYRRYVITSHTPPLHTLLFLFLLSLSALGFSISWKFKHQWWGLPIFGGFTIAITALFQYMVPSLSQDADWSVPFMPWPAAISIFLNIFLMTTLKILSFQRFAIWSCLISIFYVLYGVHSTYQAEEIEMGVHEVNSSISNLQAKVEMQVL	575

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi05g1839	575	PANTHER	INNER MEMBRANE TRANSPORTER YGJI-RELATED	32	546	-	-
	Glsi05g1839	575	Pfam	Amino acid permease	57	459	IPR002293	GO:0016020\|GO:0022857\|GO:0055085
	Glsi05g1839	575	Gene3D	Amino acid/polyamine transporter I	52	489	-	-
	Glsi05g1839	575	Pfam	C-terminus of AA_permease	496	545	IPR029485	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi05g1839	Glsi-ChrGlsi05	66008846	66011258	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi05g1839	144	550	Organic Solute Cotransporters	AT3G10600	51.196	5.25e-142	416