Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1837 ATGACTTGCAACATGGAAGGAAGTGGGTTATCTGAGACATCTTGTCTGTGTGCAACAACCATGAACTTATTCCCAACCAAGGAGGACAACATGACATCACAGTACATGACAACTATCAATTTTCTCTCTCAGCAAGCTGCTTTACGTCCCCATCTCTCCACAGAAGAGATCCCAAAGATGGAAAATTCAAGCGTAATTAAATCTGTGACTAAGGAGTCTAAAACTGCCCAGTTGACAATCTTTTATGCTGGGCAAGTTATTGTATTCGATGATTTTCCAGCTGAAAAAGCTACGGAGATCGTGTCCTTTGCCAGCAAAGGAATCTCCCCAATCCAGAACAACTCTTCTTATACTTCTACTCAGAGCCAGCCTTCGTTTCCTCCTAATTCAATCAGAATTTCCGCTGATTCCAGTAGTCCAGTTCTCTCTAATGTGAATATTATCCCTAATACTGGCAACAATTTGGTTGAAGGGCAACCTCAAGCACCATCTGGACCTGTTGTTCGGGATCTACCAATTGCTAGGAAAGCTTCACTTCATCGGTTCTTGGAGAAGAGGAAGGATAGAATTGCTGCCAAAGCACCATATCAAACTAGCAACCCCATGGCGTCCCCTTCTAAGCCAACCGAATCCATGTCATGGCTTGGGTTGGCTCCTCAATCGCCACAAATCTGA 675 0.44 MTCNMEGSGLSETSCLCATTMNLFPTKEDNMTSQYMTTINFLSQQAALRPHLSTEEIPKMENSSVIKSVTKESKTAQLTIFYAGQVIVFDDFPAEKATEIVSFASKGISPIQNNSSYTSTQSQPSFPPNSIRISADSSSPVLSNVNIIPNTGNNLVEGQPQAPSGPVVRDLPIARKASLHRFLEKRKDRIAAKAPYQTSNPMASPSKPTESMSWLGLAPQSPQI 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1837 224 ProSiteProfiles Tify domain profile. 71 106 IPR010399 -
Glsi05g1837 224 MobiDBLite consensus disorder prediction 197 224 - -
Glsi05g1837 224 Pfam tify domain 73 105 IPR010399 -
Glsi05g1837 224 Pfam Jas motif 172 197 IPR018467 -
Glsi05g1837 224 SMART tify_2 71 106 IPR010399 -
Glsi05g1837 224 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 19 209 IPR040390 -
Glsi05g1837 224 MobiDBLite consensus disorder prediction 189 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1837 Glsi-ChrGlsi05 65995449 65997509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1837 1 220 Tify Gene Family AT1G19180 40.870 2.36e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Glsi05g1837 tify 2.3e-16 No_clan