Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1802 ATGACTAATTTGTCATTCTCTCTCCTCTCTCTGGACCGAGGAACATCTCTAGGAATGGAGTTCTTGGACGAAGATGCAAGGCCAAGGTTCCTCTTCCAATCACGAGCCCCTAATACTTCAGTGTCAGACCCAGAAGATTACCAGAAACCCAGCAAACCTTTTCTCTTTATCACTGTCTCAGTCTCTTGCCTCTTATTGTGTCTCTCAGTTTTCTTACTCCAATCCGAACCCTTCAGATCGCTTCTCTTTTGGGTCTCCATTTCGCTCCTTATCGGCCCATTCGCACCCATTTCGCTCACCAGTGGCGACATTCGCGTCGGACATGGCTCAATTGTTGAATTTCCCAATCAAGAAACCACAAACGATGAGGAAACAAAGAAGAGGACGTTGCAGAAGAGATCGAAAACGCGTAGATCTGAGGAATTTGGTATTTGGCCCGTAGCAGTGGTCGAGAACGTTGGCGCGTCTGAGCGAGAGAATAATAACAGCCAAGCTTGCGGAGACCAAGGGAATGGGGTTCTAGTGGAGGAAGAGAAGGAGTGGACTGAAGAGGACATGGAGAATTTGAGGAAGCAGATGTTGAAACACCCTGTGGGGAAACCTAGACGATGGGAGGTGATTGCAGAGGCGTTCAGAGGGCGGCATAAGATGGAGAGTGTGATCAAGAACGCAAAGCAGTTAGGGGAGAAGAAACTGGATGATGCTGATTCTTATGCACAGTTTTTGAAGAAGAGAAAGCAGGTGGATAAGAGACTTGAGAATGGGAATGAAAATTTGGAAGGCGAGTCGATGGAGAAAGCTCAAAGCAGCAGGACAGATGCCAGAGGTGGTGAAGGACCTGGAAGTAGTTGGAGTACCGGGGAGGATATTGCACTGCTTAACGCTTTGAAGGCTTTCCCGAAGGATGTTTCTATGAGATGGGAGAAGATTGCATCTGCGGTGCCAGGGAAATCCAAGGCAGCTTGCGTGAAAAGAGTTGCTGAATTGAAAAAGGATTTTCGGAGTGCAAAAGCTGACAACGATGGGTAG 1029 0.4781 MTNLSFSLLSLDRGTSLGMEFLDEDARPRFLFQSRAPNTSVSDPEDYQKPSKPFLFITVSVSCLLLCLSVFLLQSEPFRSLLFWVSISLLIGPFAPISLTSGDIRVGHGSIVEFPNQETTNDEETKKRTLQKRSKTRRSEEFGIWPVAVVENVGASERENNNSQACGDQGNGVLVEEEKEWTEEDMENLRKQMLKHPVGKPRRWEVIAEAFRGRHKMESVIKNAKQLGEKKLDDADSYAQFLKKRKQVDKRLENGNENLEGESMEKAQSSRTDARGGEGPGSSWSTGEDIALLNALKAFPKDVSMRWEKIASAVPGKSKAACVKRVAELKKDFRSAKADNDG 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1802 342 Gene3D - 175 232 - -
Glsi05g1802 342 Gene3D - 278 340 - -
Glsi05g1802 342 MobiDBLite consensus disorder prediction 249 272 - -
Glsi05g1802 342 SUPERFAMILY Homeodomain-like 179 217 IPR009057 -
Glsi05g1802 342 CDD SANT 283 325 IPR001005 -
Glsi05g1802 342 SMART sant 280 332 IPR001005 -
Glsi05g1802 342 SMART sant 177 230 IPR001005 -
Glsi05g1802 342 MobiDBLite consensus disorder prediction 249 286 - -
Glsi05g1802 342 FunFam Myb family transcription factor 278 338 - -
Glsi05g1802 342 SUPERFAMILY Homeodomain-like 281 329 IPR009057 -
Glsi05g1802 342 ProSiteProfiles Myb-like domain profile. 282 325 IPR001005 -
Glsi05g1802 342 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 156 338 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1802 Glsi-ChrGlsi05 65683896 65684924 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi05g1802 None None None