Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1789 ATGTTTTTAAGTAAACTAACATATTTACGCAATGAGCTTCACCTTACTGCGACGTTTACACTCTTGGTAATTGGGGTCGAAGAATTATTTCCTTCAATGGAGGTTATGAGACTCTTATTGATCGCACTTACTATATTTGTCAACACTAGAACTCTGAGCGGTGATGGCCTTCTTGTTTATGAATACTACAAGGAGACGTGCCGCTTGGCGGAAGATATTGTGAGACATAACGTCGAGGTTGCAGTTTTCAGAGATCCTCGTTTGGCAGCCTCGCTACTTCGCTTGCATTTTCATGATTGTTTTGTCATGGGGTGTGATGCATCTGTGCTTTTGGACAGCGTTGAGGGTATGACTAGTGAAAAGCAGGCAGTACCAAATCTGAACTCATTACGGGGATTTGAGGTTATAGACAAGATTAAGTTTTTGCTGGAAGAGGAGTGTCCTCTCACGGTTTCATGTGCTGATATCCTTGCCATGGTTGCTCGTGATGCAGTTGAACTGAGAGGAGGGCCAAGATGGGACGTCTTGCTGGGGAGGAAGGACTCTCTCGTGTCAAGCTTCAGTGGAGCTAACCAGTTCATCCCTGCTCCAAATTCATCTTTAGAGGGCCTCATTGACAATTTTAAAAAGCAGGGCCTAGACATAGAAGACTTGGTAGCTTTATCAGGTAGCCACACCATTGGAAGGGCAAGATGTCTAAGCTTCAGACAACGGATCTATGACCCGAAACCGGAATATCATTATGGCTATGATCGTTACAAGCGGTATACAACATTCAGAAGAGTTCTACGGTCGATATGCCCTGTTACAGGAAGGGACCACAAATTTGCGCCCCTGGATTTTGAAACCCCAGCTAAGTTTGATAATCACTACTTCATAAACATCCTCCAAGGCAAGGGCTTGTTAGGTTCTGATAACGTGTTGATCAGCCAGGACTACGAGGGAGTGATCAAAAACCAAGTGTGGGCTTATGCCTCTAACCCAAAGCTTTTCTTTGCTTCATTTGCTAAATCTATGATCAAGATGGGAAACATCAACGTCCTCACAGAAAATGAAGGAGAAATCAGGAGGAATTGTAGGTTTGTCAACACTTAA 1095 0.4384 MFLSKLTYLRNELHLTATFTLLVIGVEELFPSMEVMRLLLIALTIFVNTRTLSGDGLLVYEYYKETCRLAEDIVRHNVEVAVFRDPRLAASLLRLHFHDCFVMGCDASVLLDSVEGMTSEKQAVPNLNSLRGFEVIDKIKFLLEEECPLTVSCADILAMVARDAVELRGGPRWDVLLGRKDSLVSSFSGANQFIPAPNSSLEGLIDNFKKQGLDIEDLVALSGSHTIGRARCLSFRQRIYDPKPEYHYGYDRYKRYTTFRRVLRSICPVTGRDHKFAPLDFETPAKFDNHYFINILQGKGLLGSDNVLISQDYEGVIKNQVWAYASNPKLFFASFAKSMIKMGNINVLTENEGEIRRNCRFVNT 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1789 364 ProSitePatterns Peroxidases proximal heme-ligand signature. 217 227 IPR019793 -
Glsi05g1789 364 Gene3D Peroxidase, domain 2 195 342 - -
Glsi05g1789 364 SUPERFAMILY Heme-dependent peroxidases 59 363 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi05g1789 364 PRINTS Haem peroxidase superfamily signature 280 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1789 364 PRINTS Haem peroxidase superfamily signature 217 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1789 364 PRINTS Haem peroxidase superfamily signature 89 103 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1789 364 PRINTS Haem peroxidase superfamily signature 151 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1789 364 PRINTS Haem peroxidase superfamily signature 169 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1789 364 CDD secretory_peroxidase 58 362 IPR033905 GO:0004601|GO:0042744
Glsi05g1789 364 FunFam Peroxidase 195 342 - -
Glsi05g1789 364 Gene3D - 62 363 - -
Glsi05g1789 364 ProSitePatterns Peroxidases active site signature. 89 100 IPR019794 GO:0004601
Glsi05g1789 364 ProSiteProfiles Plant heme peroxidase family profile. 57 363 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1789 364 PRINTS Plant peroxidase signature 67 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1789 364 PRINTS Plant peroxidase signature 337 350 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1789 364 PRINTS Plant peroxidase signature 294 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1789 364 PRINTS Plant peroxidase signature 91 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1789 364 PRINTS Plant peroxidase signature 169 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1789 364 PRINTS Plant peroxidase signature 278 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1789 364 PRINTS Plant peroxidase signature 150 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1789 364 PRINTS Plant peroxidase signature 216 228 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1789 364 PRINTS Plant peroxidase signature 131 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1789 364 Pfam Peroxidase 75 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1789 364 PANTHER PEROXIDASE 72-RELATED 58 362 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1789 364 FunFam Peroxidase 61 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1789 Glsi-ChrGlsi05 65603121 65605324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1789 117 363 Peroxidase AT2G35380 68.826 2.69e-126 361