Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1784 ATGGCAACCACTAATCTTCATTTTTCACTGTCTATGTTGAAATTGGATATCACCAGGCAACCTGATCTATCGTCTTCAAAATATCAGAGCGAGCTTGTATTTGATTCTAAACCCAGAAGAAAATGCATTCGACGGCAAACTTTCGTCGTGCCATCAATGAAGATCATCGAGCACAGCCAGAGAGGCGAAATAACGTCTCCCAATGGTTCTGCGAGCACTGGCCAGACAGACTCTTCATTTGAGCCACAGTCTAGTAACTATGCTGTGGGGCTGGCAGAGGCAAATTCAAATCCACTCAGAAAAACTAAGATTGTATGTACAATAGGTCCTTCTACCAGCTCACGTGAAATGATATGGAAACTGGCTGAAACTGGAATGAATGTGGCACGTTTAAATATGTCACATGGGGACCATGCATCACACCAGAAAACCATTGATTTGGTAAAAGAATACAATGCTAAGTTTGAAGACAAGGTTATAGCTATAATGCTTGATACCAAGGGTCCGGAAGTTAGAAGTGGGGATGTACCTCAACCAATTCTACTAAAAGAGGGCCAAGAATTCAATTTCACCATTAGAAGGGGGATCAGCACAAAAGACACAGTTAGTGTAAATTATGATGATTTTATAAATGATGTGGAGGTTGGAGACATACTACTTGTTGACGGTGGAATGATGTCTCTTGCTGTTAAGTCAAAGACAAAGGATTTGGTTAAATGTGAAGTGATTGATGGTGGAGAACTGAAATCAAGACGTCATTTAAATGTCCGTGGAAAAAGTGCAACACTTCCTTCCATAACTGACAAAGACTGGGAAGATATCAAGTTTGGGGTGGACAATCAAGTAGATTTCTATGCTGTCTCATTTGTAAAGGATGCTAGAGTGGTTCATGAGTTAAAGGACTATCTCAAAAGTCGCAATGCTGATATTCATGTGATTGTAAAAATTGAAAGTGCAGATTCAATAGCAAATCTTCATTCAATACTTTCAGCTTCAGATGGGGTTATGGTTGCTCGTGGGGACCTTGGGGCTGAACTTCCAATAGAGGAAGTTCCTTTATTGCAGGAGGACATCATTAAAAGATGTCACAGTATGCAAAAGCCAGTAATTGTGGCAACAAATATGCTGGAAAGCATGATCAATCACCCTACGCCAACAAGGGCAGAAGTTTCAGATATTGCAATTGCCGTAAGAGAAGGTGCTGATGGAATTATGCTTTCGGGAGAGACTGCACATGGAAAATATCCACTGAAAGCTGTTAAAGTTATGCATACAGTGGCACTAAGGACTGAGTCAAGTGTTCCATGTAGTGTTGCTCCTCCTAATCAATTGAGTGCCCACAAGAGCCATATGGGAGAAATGTTTGCTTTCCATGCGACAACTATGTCTAACACCCTTAGTACTCCCATAATTGTTTTTACCAGAACAGGATCCATGGCTGTTCTCTTGAGCCATTACAGGCCTCATTCAACAATCTTTGCATTCACAAATGAAGAAAGGATTAAGCAGAGGCTGGTGCTCTATCATGGTGTCATGCCCATCTACATGCAATTTTCAAATGATGCAGAGGAGACCTTCTCTAGAGCTCTCAAGCTACTTTTGAGTAAGGGGCTTTTAGCTGAGGGACAGCATGTCACTCTTGTTCAAAGTGGAGCACAACCAATCTGGCGTGAGGAATCTACTCACTGCATACAAGTTCGTAAGGTTCATGGATGA 1716 0.4149 MATTNLHFSLSMLKLDITRQPDLSSSKYQSELVFDSKPRRKCIRRQTFVVPSMKIIEHSQRGEITSPNGSASTGQTDSSFEPQSSNYAVGLAEANSNPLRKTKIVCTIGPSTSSREMIWKLAETGMNVARLNMSHGDHASHQKTIDLVKEYNAKFEDKVIAIMLDTKGPEVRSGDVPQPILLKEGQEFNFTIRRGISTKDTVSVNYDDFINDVEVGDILLVDGGMMSLAVKSKTKDLVKCEVIDGGELKSRRHLNVRGKSATLPSITDKDWEDIKFGVDNQVDFYAVSFVKDARVVHELKDYLKSRNADIHVIVKIESADSIANLHSILSASDGVMVARGDLGAELPIEEVPLLQEDIIKRCHSMQKPVIVATNMLESMINHPTPTRAEVSDIAIAVREGADGIMLSGETAHGKYPLKAVKVMHTVALRTESSVPCSVAPPNQLSAHKSHMGEMFAFHATTMSNTLSTPIIVFTRTGSMAVLLSHYRPHSTIFAFTNEERIKQRLVLYHGVMPIYMQFSNDAEETFSRALKLLLSKGLLAEGQHVTLVQSGAQPIWREESTHCIQVRKVHG 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1784 571 FunFam Pyruvate kinase 265 430 - -
Glsi05g1784 571 PANTHER PYRUVATE KINASE 73 547 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi05g1784 571 Gene3D - 169 264 IPR015806 GO:0004743|GO:0006096
Glsi05g1784 571 PRINTS Pyruvate kinase family signature 389 407 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi05g1784 571 PRINTS Pyruvate kinase family signature 312 338 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi05g1784 571 PRINTS Pyruvate kinase family signature 282 296 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi05g1784 571 PRINTS Pyruvate kinase family signature 158 174 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi05g1784 571 PRINTS Pyruvate kinase family signature 364 388 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi05g1784 571 PRINTS Pyruvate kinase family signature 408 424 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi05g1784 571 PRINTS Pyruvate kinase family signature 339 363 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi05g1784 571 MobiDBLite consensus disorder prediction 59 83 - -
Glsi05g1784 571 Gene3D - 100 430 IPR040442 -
Glsi05g1784 571 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 98 434 IPR015813 GO:0003824
Glsi05g1784 571 Gene3D - 431 549 IPR036918 -
Glsi05g1784 571 FunFam Pyruvate kinase 431 550 - -
Glsi05g1784 571 Pfam Pyruvate kinase, barrel domain 100 434 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi05g1784 571 SUPERFAMILY PK beta-barrel domain-like 169 260 IPR011037 -
Glsi05g1784 571 ProSitePatterns Pyruvate kinase active site signature. 310 322 IPR018209 GO:0004743|GO:0006096
Glsi05g1784 571 NCBIfam pyruvate kinase 100 569 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi05g1784 571 Pfam Pyruvate kinase, alpha/beta domain 468 549 IPR015795 -
Glsi05g1784 571 SUPERFAMILY PK C-terminal domain-like 418 569 IPR036918 -
Glsi05g1784 571 FunFam Pyruvate kinase 170 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1784 Glsi-ChrGlsi05 65571769 65584213 Dispersed/Wgd