Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1780 ATGGGCTGGCCATTCGTGGGCAACATGCCCACCTTCCTTAAAGCATTCAGATCTGTCGACCCTGAATCCTTCATCTACGACCTTGTTTCCAGATATGGAAAGACTGGCATGTACAGAAGCTATCTGTTTGGGAGACCAAGCATCATCGTTTGCTCCCCAGAGACGTGCCGAAAAGTGCTCACGCAAGACCAGCAATTCAAGCTTGGATACCCTGCCTCCACTGTGGCCCTCACGGGCAATACATCATTCCACCAAATTTTCAATGCAGACAAGCGCTTCCGCCGCCTAGCCTCCTCTCCAATGGGCCAAACCGCTTTATCGCTGCATATAGAGCGTTTTGAGGAAATTATGGTGAGTTCCCTGGAAGAATGGGCCAGCATTAGCATGAAGCACCCGGTGGAGCTCTTCGGAGAGATGAAGAAGGCTACCTTTAAAGTCATTATTCACATTTTCATGGGATCTTACAATCATTCTACCCTCACCGAAATAGAAGATTTGTTCTCTCAGCTCCTCAATGGCGTACACGCTTCCGCCATTAATCTTCCGGGTTTTGCTTTCCACAAAGCACTCAAGGCGCGAAGAAAATTGGAGAGGATTGTTCAAACTGTTGTGAGTGAAAGAAGAATGATGATGATAAAAGGTGGCGAAGAGGAGGGAAAGAAACAAGATCTACTGGACATTCTTTTGGGAGTTGAAGGTGAAAATGGTCGGAAAATGGAGGATAAGGATATCGTTGACTTGTTGGTTGTGTTTCTATTCGCCGGTCAAATAACCACTGCGCTTGCTATCGCATGGTCACTCATCTTTCTCACAGAGCATCCACAGATCATGAAGAAAGCTAAGGAAGAGCAAGAAGAGATCATGAAAACAAGACCAAGTTCACAGAAAGGACTAAATCTGAAGGAAATTAAGCAAATGGTGTATCTTTCTAAGGTAATTGACGAAACCCTGCGCCTTGGTAATTTAACCTTTTCACCGTTTCGGCTGGCAAATGAAGATGTCAACATAAATGGTTATACAATTCCTAAAGGATGGAAAGTAATCGTTTGGGCAAGAGCTGTTCACATGGATCCTCAATATCACACTAATCCGCGAGAATTTAATCCTTCCAGATGGGATAATTACAATCCACAATCGGGGTCCTTGTTTCCTTTCGGTGCAGGAATCAGGCTGTGTCCCGGAAGAGATCTAGCCAAGCTTTCCATTTCCATATTTCTTCATCATTTCCTCCTTAATTACAAGATGGAACGAGTAAATCCAAAATGCCGGATCAACTACTTGCCAGTACCAAGGCCTGTAGATAACTGCCTCGCTAGAATCCTGAAGTTGGTCCCTTGA 1338 0.4484 MGWPFVGNMPTFLKAFRSVDPESFIYDLVSRYGKTGMYRSYLFGRPSIIVCSPETCRKVLTQDQQFKLGYPASTVALTGNTSFHQIFNADKRFRRLASSPMGQTALSLHIERFEEIMVSSLEEWASISMKHPVELFGEMKKATFKVIIHIFMGSYNHSTLTEIEDLFSQLLNGVHASAINLPGFAFHKALKARRKLERIVQTVVSERRMMMIKGGEEEGKKQDLLDILLGVEGENGRKMEDKDIVDLLVVFLFAGQITTALAIAWSLIFLTEHPQIMKKAKEEQEEIMKTRPSSQKGLNLKEIKQMVYLSKVIDETLRLGNLTFSPFRLANEDVNINGYTIPKGWKVIVWARAVHMDPQYHTNPREFNPSRWDNYNPQSGSLFPFGAGIRLCPGRDLAKLSISIFLHHFLLNYKMERVNPKCRINYLPVPRPVDNCLARILKLVP 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1780 445 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 385 394 IPR017972 GO:0005506|GO:0016705
Glsi05g1780 445 SUPERFAMILY Cytochrome P450 2 438 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1780 445 Gene3D Cytochrome P450 1 443 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1780 445 PRINTS E-class P450 group I signature 350 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1780 445 PRINTS E-class P450 group I signature 382 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1780 445 PRINTS E-class P450 group I signature 392 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1780 445 PRINTS E-class P450 group I signature 243 260 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1780 445 PRINTS E-class P450 group I signature 263 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1780 445 PRINTS P450 superfamily signature 254 271 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1780 445 PRINTS P450 superfamily signature 383 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1780 445 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1780 445 PRINTS P450 superfamily signature 311 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1780 445 PANTHER CYTOCHROME P450 26 1 431 - -
Glsi05g1780 445 CDD CYP90-like 29 440 - -
Glsi05g1780 445 Pfam Cytochrome P450 3 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1780 Glsi-ChrGlsi05 65540269 65543366 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1780 1 445 Cytochrome P450 AT2G32440 48.770 3.17e-161 462