Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1779 ATGGAGTTTTCTGGTTTGATGATCCTAGGCGCAGCTTTCTTGGGTGGATATGCATTTTTGTTTGGGTTGGTGAGGAGAGTGAATGAGTGGTACTATGTTGGGAGGATGCATGGAAAGACCGAATTCCCTCTCCCTCCTGGTCATATGGGTTGGCCTTTCCTGGGCAACATGCTCTCCTTCCTTAAAGCATTCAAGTCTGACCCTGATTCCTTCATCTACGACCTTGTTTCCAGATATGGAAGGAGTGGCATGTACAGAAGTTATCTGTTTGGAAGCCCAAGCATCATCGTGTGCACCCCAGAGACGTGCCGAAAAGTTCTCACGGATGAAGAGCAATTCAAGCTTGGATACCCGGCCTCCACCATGGCCCTCACAGGCAAAAGGTCTTTCCACAGCATTTCCAATGCAGAGCACAAGCGCCTCCGCCGCCTAACCACCGCTCCCATTACGGGCCACGAGGCTTTGTCTATGTATGTTGATCTTATAGAAGAAATTGTGGTCAAATTGCTGGATGAATTGTCTTCCATGAACAGGCCTATTGAATTCTTGAGAGAGATGAGGAAGTTTGCTTTCACCGTCATCACCAACATCTTCGTGGGCTCTGACGTTGACTATGTGGACCTTGGCTTGGTCGAGAACTTGTACACCGACTTGAATCGGGGAATGAAATCCCAAGCCATTAATCTTCCGGGCTTTGCTTTCCATAAAGCACTCAAGGCTCGAAAGAAGTTGATGAAGCTGCTGCAAGGTTTGCTGGAGAGAAAGAAAAGGACGAACAAGACGAAGATGAAGAAAGATATGATGGATTTATTGATGGAAGTGAAAGACGAAGAGGGAAAGCAACTGGAGGATGAAGACATAATAGACCTGCTTCTCATATTCTTGTTGGCCGGTCACGAAAGCTCCGCTCACGGTATATTGTGGACCGTCATCTACCTCACGCAGCACCCACACGTCTTCAAGAGGGCCAAGAAAGAACAAGAAGAGATCGTGGGAAGAAGACCTTCCTCACAGAAAGGGCTGAATCTGAAGGAAATCAAGCAAATGGAGTACCTTCCCAAGGTTATTGATGAGATGCTGCGCAGAACAAGTATCTCATTTGCAAACTTCAGAGAGTCAAAAGTGGATGTCAACATCAATGGTTACACTATACCTAAAGGATGGAAAGTTCTGGTGTGGAACAGAGGTGTTCACATGGATCCTGAAACTTACGTCAACCCAAAGGAATATGATCCTTCCAGATGGGATAATTTCAGAGGAAAAGCAGGGTGTTTCCTTCCGTTTGGATCAGGTAGTAGGTTTTGTCCGGGAAGTGACCTTGCCAAACTTGAGATCACCATTTTCCTCCATCATTTTCTCCTAAACTACAGGATTGAAAGAGTTAATGAAGAATGTCCCCTGACCTACTTACCAGTGCCAAAGCCTTCGGACAACTGTCTTGCACGAATTATAAGAGTTGCATAA 1464 0.4604 MEFSGLMILGAAFLGGYAFLFGLVRRVNEWYYVGRMHGKTEFPLPPGHMGWPFLGNMLSFLKAFKSDPDSFIYDLVSRYGRSGMYRSYLFGSPSIIVCTPETCRKVLTDEEQFKLGYPASTMALTGKRSFHSISNAEHKRLRRLTTAPITGHEALSMYVDLIEEIVVKLLDELSSMNRPIEFLREMRKFAFTVITNIFVGSDVDYVDLGLVENLYTDLNRGMKSQAINLPGFAFHKALKARKKLMKLLQGLLERKKRTNKTKMKKDMMDLLMEVKDEEGKQLEDEDIIDLLLIFLLAGHESSAHGILWTVIYLTQHPHVFKRAKKEQEEIVGRRPSSQKGLNLKEIKQMEYLPKVIDEMLRRTSISFANFRESKVDVNINGYTIPKGWKVLVWNRGVHMDPETYVNPKEYDPSRWDNFRGKAGCFLPFGSGSRFCPGSDLAKLEITIFLHHFLLNYRIERVNEECPLTYLPVPKPSDNCLARIIRVA 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1779 487 Gene3D Cytochrome P450 35 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1779 487 SUPERFAMILY Cytochrome P450 42 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1779 487 Pfam Cytochrome P450 45 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1779 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Glsi05g1779 487 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1779 487 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1779 487 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1779 487 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1779 487 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1779 487 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1779 487 PANTHER CYTOCHROME P450 26 44 471 - -
Glsi05g1779 487 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1779 487 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1779 487 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1779 487 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1779 Glsi-ChrGlsi05 65531230 65533669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1779 6 483 Cytochrome P450 AT1G05160 54.865 0.0 547