Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1778 ATGGCACTCAGAATGTGGGCTTCTTCAACTGCTAATGCACTCAAAATCTCTTGTGCCACCAGACCTGCTTTTTCTCTCTCCAGATGCTTCTCTACGGTGTTGGATGGACTCAAGTACGCATCTTCGCATGAATGGGTCAAGCATGAAGGTTCGGTGGCTACAATTGGTATCACAGATCATGCCCAGGACCATCTTGGAGAGGTTGTGTTTGTGGATCTCCCAGAATCAGGTGGGTCAGTGTCCCATGGTGGCAGCTTCGGAGCAGTTGAAAGTGTTAAAGCAACCAGTGACGTCAATTCTCCAATCTCCGGAGAGGTTGTTGAGGTTAACTCAAAGCTCACAGAAAATCCAGGCCTGGTCAACTCAAGCCCATATGAAGATGGATGGATGATCAAAATAAAGCCAAGCAATCCATCCGAGTTAGATTCCTTGATGGGTCCGAAAGAATACACAAAATTTTGTGAGGAAGAAGATGCTGCGCATTGA 486 0.4671 MALRMWASSTANALKISCATRPAFSLSRCFSTVLDGLKYASSHEWVKHEGSVATIGITDHAQDHLGEVVFVDLPESGGSVSHGGSFGAVESVKATSDVNSPISGEVVEVNSKLTENPGLVNSSPYEDGWMIKIKPSNPSELDSLMGPKEYTKFCEEEDAAH 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1778 161 CDD GCS_H 39 133 IPR033753 -
Glsi05g1778 161 Gene3D - 31 161 - -
Glsi05g1778 161 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 77 106 IPR003016 -
Glsi05g1778 161 ProSiteProfiles Biotinyl/lipoyl domain profile. 52 134 IPR000089 -
Glsi05g1778 161 Pfam Glycine cleavage H-protein 37 156 IPR033753 -
Glsi05g1778 161 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 3 158 IPR002930 GO:0005960|GO:0019464
Glsi05g1778 161 FunFam Glycine cleavage system H protein 31 157 - -
Glsi05g1778 161 NCBIfam glycine cleavage system protein GcvH 35 158 IPR017453 GO:0005960|GO:0019464
Glsi05g1778 161 SUPERFAMILY Single hybrid motif 33 156 IPR011053 -
Glsi05g1778 161 Hamap Glycine cleavage system H protein [gcvH]. 34 155 IPR002930 GO:0005960|GO:0019464
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1778 Glsi-ChrGlsi05 65521408 65522309 Dispersed/Wgd