Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1777 ATGGGAAGTGGACTTTCTTCTTGCTTCAAACCGGTTGACCGGACCACCAACCAACCGGACCAGCAGGAAGTGATCTTTGCCGCCACTGAGCCTTTGGACGAAACCCTAGGCCATTCCTTCTGCTACGTTAGATCTTCTGCTCGCTTCCTCTCGCCCACCCACTCGGATCGATTCGTCTCGCCTTCTAACTCCCTCCGCTTTTCTCCCTCTCACGAACCCGTATCCAGAGTCCGACCCGATTTACCCGAAACCGTCTTCAAGGCCATTTCCGGTGCTTCCGTCAGTGCCAACAGTTCCACTCCCAAAACTGTTCTCCAGCTAGACAATATCCGCGATGATGTTACGGATAGTGCCGTTGGTGGCGGCGTGAGAGGAAGTATTGTCAATGGCTTCGAAAGCACATCGTCGTTTAGTGCTCTCCCGCTTCAGCCAGTCCCCAGAGGGGGTGACCCCTCGGGTCCGGTAGAGAGGGGCGCTTTCTTTCTATCTGGTCCAATTGAGCGCGGTGCCCTCTCCGGGCCTCTCGAATCAAACGCCGCCACGGAAGGTGGGGGCGGGGTCCCTTTCTCGGCGCCTCTGGGTGGCTTTTATGTCAAAAAGAAGCGGAAGAGGGTCGTTTCCAGGTTTAGGAAAGCATTCCATGGTAACCTTTCTGAGAAGAAGCGGCCTTGGGTTGTGCCGGTTTTGAATTTCGTCGGCAGAAAAGAAATTCCGGCTTACGAAGAGAAACCGGAGATAAAAAATGAGAGTAACGTACAGTGGGCGCTTGGAAAGGCAGGAGAGGATCGAGTGCATGTAGTTGTATCGGAAGAGCACGGCTGGTTGTTTGTTGGGATTTACGACGGCTTTAATGGCCCTGACGCGCCAGAATTTTTGATGAGTCATCTTTACCGTGCTGTTTACAATGAGCTGCAGGGTTTGTTTTGGGAAGTTGAAGAGGCGGAGGAAGTTAACCCATTGACTGTGGCTGTCGAGAATGCAGTGCTCGGAGAGCAAACTGAACCATCAATTGGAATCTCCCGCGAAGACTTCAAAAGTGAGGAGAACATTTCTGTGACTGGAGAAATTTCCAATTCATTGCCTTTTGATCGAGAATCAGCAAAGAGAGTAACATTTCAAGCAGAGGGAACGGAAAGTAGGCGGCGCAGATTATGGGAATTTCTTGCCGAAGATGATCCTGAAGACGGGCTTGATCTTTCAGGGTCGGATAGATTTGCATTTTCTGTTGATGATGCACTCAGCGTGAGCAATGCGGGCTCAGCAGTTAGTAGGCGGTGGCTATTGTTATCGAAATTGAAGCATGGACTATCAAAGCATAAGGAGGGTCATGGTAGAAAGTTGTTACCCTGGAACTTCGGCACAGAGGATAAAGAGAAGGTTGAAGAAGAAAATCGGGCAGAAGAGATGTCTTCTGGTGGTAATAGGAGGCGCAAAGTGGGTCCCGTGGATCATGATTTGGTTTTGAGTGCATTATCTCGGGCTCTTGAATTGACCGAACTTGCATATTTGGATATGACGGATAAGGTTCTAGATACAAACCCAGAGATCGCTTTAATGGGGTCATGTCTGTTAGTTGTTTTAATGAGGGATGAAGATGTATACGTGATGAATGTGGGAGATAGCCGAGCCATTGTTGCACAATATGAACCCAAAGAGGTTAATTCTAGTATGGAATTGGAGAGCAAGGGAGATAAGGGGTCAAGCAAGGAGAGCATTGTTGAGGAGTCCTTGACTCTTGGTGAAAGCGCAAACAAGTTGGGGAATGAGGGTCCTGCTCAAGAAATGAGGCTGATTTCGTTGCAGCTGTCCACTGACCACAGCACGAGCATTGAGGAGGAAGTCATTAGGATTAAGAATGAACATCCAGACGATAGCCATTGTATTGTGAATGACAGAGTGAAAGGACGTCTTAAGGTCACAAGAGCATTTGGGGCAGGATTTTTGAAACAGCCGAAGTGGAATGATCCATTACTAGAAATGTTTCGTAATGAATATATTGGCACTGCTCCATATATATCCTGCAGTCCTTCGCTACGTCACCATAGATTATGCCCAGGAGATCAGTTCTTGATCCTCTCATCTGATGGTTTATATCAATATCTAAGCAATCAAGAAGTGGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCAGATGGAGATCCTGCCCAACATTTGATAGAGGAGCTGCTCTTCCGTGCTGCCAAGAAAGCTGGAATGGATTTACATGAGTTGTTGGATATCCCACAAGGAGATCGAAGGAAGTACCATGATGATGTTACTGTTATGGTGATATCACTTGAAGGGAGAATCTGGAAATCATCAGGGAAGTATCTATGGCGCTTCTATATTTGCTTCTGGGTTAAAGCCATTTTCATTTAA 2382 0.4757 MGSGLSSCFKPVDRTTNQPDQQEVIFAATEPLDETLGHSFCYVRSSARFLSPTHSDRFVSPSNSLRFSPSHEPVSRVRPDLPETVFKAISGASVSANSSTPKTVLQLDNIRDDVTDSAVGGGVRGSIVNGFESTSSFSALPLQPVPRGGDPSGPVERGAFFLSGPIERGALSGPLESNAATEGGGGVPFSAPLGGFYVKKKRKRVVSRFRKAFHGNLSEKKRPWVVPVLNFVGRKEIPAYEEKPEIKNESNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPEFLMSHLYRAVYNELQGLFWEVEEAEEVNPLTVAVENAVLGEQTEPSIGISREDFKSEENISVTGEISNSLPFDRESAKRVTFQAEGTESRRRRLWEFLAEDDPEDGLDLSGSDRFAFSVDDALSVSNAGSAVSRRWLLLSKLKHGLSKHKEGHGRKLLPWNFGTEDKEKVEEENRAEEMSSGGNRRRKVGPVDHDLVLSALSRALELTELAYLDMTDKVLDTNPEIALMGSCLLVVLMRDEDVYVMNVGDSRAIVAQYEPKEVNSSMELESKGDKGSSKESIVEESLTLGESANKLGNEGPAQEMRLISLQLSTDHSTSIEEEVIRIKNEHPDDSHCIVNDRVKGRLKVTRAFGAGFLKQPKWNDPLLEMFRNEYIGTAPYISCSPSLRHHRLCPGDQFLILSSDGLYQYLSNQEVVSQVESFMEKFPDGDPAQHLIEELLFRAAKKAGMDLHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYLWRFYICFWVKAIFI 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1777 793 CDD PP2Cc 483 767 IPR001932 -
Glsi05g1777 793 Pfam Protein phosphatase 2C 600 729 IPR001932 -
Glsi05g1777 793 Pfam Protein phosphatase 2C 497 548 IPR001932 -
Glsi05g1777 793 PANTHER PROTEIN PHOSPHATASE 2C 247 766 IPR015655 GO:0004722|GO:0006470
Glsi05g1777 793 MobiDBLite consensus disorder prediction 457 478 - -
Glsi05g1777 793 Gene3D - 234 775 IPR036457 -
Glsi05g1777 793 ProSiteProfiles PPM-type phosphatase domain profile. 245 767 IPR001932 -
Glsi05g1777 793 SMART PP2C_4 245 765 IPR001932 -
Glsi05g1777 793 SUPERFAMILY PP2C-like 258 768 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1777 Glsi-ChrGlsi05 65508222 65515586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1777 1 779 PP2C-type Phosphatase Gene Family AT2G35350 58.570 0.0 844