Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi05g1772 | ATGGGTTGCACTGTAAGGGAAAAACACATCCGAGCGAATCGGAGACCTCGATCAGTCAAACCCGATACAGACTTCTGTTGTCTAGACCGATTTTCAATCTCCAAATCTATACTGGAATCAGGCCTCATGCCGTTGAAATACCACCTGGGTCCCAACGATTCAGCTCAAAATCCAAATCCTAATTCAAACCCAAACCTTAACCCTACCCCTAATATGGAGGAAAGCGGTTGGGGTTACTGCACAGAAGAACAATTAGAAGAAATTCTTTTGAAAAACTTGGAATTTTTGTACAATGAAGCTGTATCGAAGCTTGTTGCATTGGGGTACGATAATGACGTTGCTTTAAAAGCAGTATTGCGAAATGGGCATTGTTATGGTGGGATGGATGTGTTGACAAATATATTGCATAACTCTTTGGCATATTTAAATAGTAATTGTGGTGGTGGTAGTAGTAGTAGTAATGACAATTTGGATGAGTCCGAGCCTGTTTTCTTTGACTTGAGGCAGTTGGAGGAGTACTCCTTAGCCGGTATGGTCTGCCTCTTGCAGCAAGTAAGGCCACATTTGAGTAAAGGCGATGCTATGTGGTGTTTGCTCATGAGTGATCTTCATGTAGGAAGGGCGAGCACTATGGAAATCCCGGTGCTTCCTGTGCCAAGCGATGGTTGTCCTGCTTCTACTACAGTTGATACTGTTTGCAATTCAGGTGGTGTTATGGCCGCTCCATGTAGGTTTCACGGGGGTTGGGGATTTGCTAATGGTGGAGGCTCAGATTTCCCTGTCAATGGATTCTTCTCTTATGGTTCAGACGTGACTTTACAACGAGATATTGAATTCCCAAAGAGGTTTAATCTTTCTCCTTCAATGAAATCCTTATTGAAAAGAAACGTTGCAGTGTTTGCCGCTGGATTAAGGGCAAACTCCAAACAATTGCAGACACAAGCAAAAGCATGTCCCGGCAATAAAACTTTGTCAATTTTGGATTCTCCTGCTATACCAGGGACTGATGTCCCGATTGAGCAGTCTGGAGATTCTCAGAATCTGAATAACCAAGATGCTGTGAATTCAGTTCTGAGTAAATTCCGTGATCTGAATCTTGATGAGAATTTGGAGTCTGTGGCAGAAGATCAGAAGGATGAGGTGATAGTCACTCTATTTCATCAGATTAAAGATCTTGAGAAACAGGTAAAGGAGCGTAAAGACTGGGCCCATCTGAAAGCAATGCAAGCTGCAAGAAAGCTAAGCAATGATCTGACTGAGCTGAAAATGTTAAGGATGGAAAGAGAGGAAACTCAAAGATTGAAGAGAGGGAAACAAGTGCTTGAGGACACCACTATGAAGAGACTCTCAGAGATGGAGAATGCATTGAGAAAGGCTAGTGGTCAAGTAGACCGTGCCAATGCAGCGGTGAGAAGACTTGAGACAGAAAATGCTGAAATCAAAGCAGAAATGGAAGCTTCTAAATTGAGTGCATCTGAGTCAGTCTCAACTTGCTTGCAAGTTGCAAAAAGGGAGAAAAAGTGCTTGAAGAGGCTTCTAGCTTGGGAAAAGCAGAAAGCTAAGCTACAGCAGGAGATTTCAGATGAAAAAGATAAGATATTGGAGATACAACAAGTATTGGTTCGGATTAAACAATGTCAGAAAGAAGCTGAGATCAAGTGGAGGGAGGAGTTGAAGGCTACAGAGGAAGCCTTGACACTAGTTGAGGAGGAAAGGCGCTCTAAGGAAGGAGCCGAGGCTAATAATAAGAGGAAGCTTGAGGCTTTGCGCCTGAAGATGGAGATAGATTTCCAGCGCCACAAGGATGATCTCCTAAGACTTGAGCAGGAACTTTCACGCCTTAAATTATCTGCTCAGTCTGCTGAGTTGCATCACCAATCAAATACACCACCTACTAGTGAGGCTGAGGGTGCAAAGCCCCAGAGAGAGACAATTGCTAAGATGCTTCAAGAATTAGATAAACTGGAGGATTTTTCGGAGAAAGAAGTCAACCGTGATAGGGAATGCATTATATGTATGAAAGATGAAGTGTCTATTGTTTTCTTGCCGTGTGCACACCAAGTTATGTGTGCTAGTTGCAGTGATGAGTATGGGAGAACTGGCAAAGCTGCTTGTCCTTGCTGCCAGGTTCCAATCGAACAGAGGATCCGTGTATTTGGAGCAAGTTCTTAG | 2172 | 0.4332 | MGCTVREKHIRANRRPRSVKPDTDFCCLDRFSISKSILESGLMPLKYHLGPNDSAQNPNPNSNPNLNPTPNMEESGWGYCTEEQLEEILLKNLEFLYNEAVSKLVALGYDNDVALKAVLRNGHCYGGMDVLTNILHNSLAYLNSNCGGGSSSSNDNLDESEPVFFDLRQLEEYSLAGMVCLLQQVRPHLSKGDAMWCLLMSDLHVGRASTMEIPVLPVPSDGCPASTTVDTVCNSGGVMAAPCRFHGGWGFANGGGSDFPVNGFFSYGSDVTLQRDIEFPKRFNLSPSMKSLLKRNVAVFAAGLRANSKQLQTQAKACPGNKTLSILDSPAIPGTDVPIEQSGDSQNLNNQDAVNSVLSKFRDLNLDENLESVAEDQKDEVIVTLFHQIKDLEKQVKERKDWAHLKAMQAARKLSNDLTELKMLRMEREETQRLKRGKQVLEDTTMKRLSEMENALRKASGQVDRANAAVRRLETENAEIKAEMEASKLSASESVSTCLQVAKREKKCLKRLLAWEKQKAKLQQEISDEKDKILEIQQVLVRIKQCQKEAEIKWREELKATEEALTLVEEERRSKEGAEANNKRKLEALRLKMEIDFQRHKDDLLRLEQELSRLKLSAQSAELHHQSNTPPTSEAEGAKPQRETIAKMLQELDKLEDFSEKEVNRDRECIICMKDEVSIVFLPCAHQVMCASCSDEYGRTGKAACPCCQVPIEQRIRVFGASS | 723 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi05g1772 | 723 | Pfam | Zinc finger, C3HC4 type (RING finger) | 666 | 714 | - | - | |
Glsi05g1772 | 723 | Coils | Coil | 568 | 588 | - | - | |
Glsi05g1772 | 723 | Coils | Coil | 449 | 490 | - | - | |
Glsi05g1772 | 723 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 654 | 720 | IPR013083 | - | |
Glsi05g1772 | 723 | MobiDBLite | consensus disorder prediction | 619 | 640 | - | - | |
Glsi05g1772 | 723 | MobiDBLite | consensus disorder prediction | 619 | 635 | - | - | |
Glsi05g1772 | 723 | Pfam | Family of unknown function (DUF6592) | 92 | 209 | IPR046527 | - | |
Glsi05g1772 | 723 | SUPERFAMILY | RING/U-box | 668 | 715 | - | - | |
Glsi05g1772 | 723 | SMART | ring_2 | 669 | 708 | IPR001841 | - | |
Glsi05g1772 | 723 | CDD | RING-HC_MIP1-like | 664 | 718 | - | - | |
Glsi05g1772 | 723 | MobiDBLite | consensus disorder prediction | 52 | 74 | - | - | |
Glsi05g1772 | 723 | Coils | Coil | 512 | 539 | - | - | |
Glsi05g1772 | 723 | MobiDBLite | consensus disorder prediction | 49 | 74 | - | - | |
Glsi05g1772 | 723 | Coils | Coil | 590 | 624 | - | - | |
Glsi05g1772 | 723 | ProSiteProfiles | Zinc finger RING-type profile. | 669 | 709 | IPR001841 | - | |
Glsi05g1772 | 723 | PANTHER | OS05G0141500 PROTEIN | 1 | 718 | IPR046934 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi05g1772 | Glsi-ChrGlsi05 | 65484813 | 65488119 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi05g1772 | 649 | 719 | C3H Transcription Factor Family | AT1G73950 | 36.000 | 5.51e-08 | 53.9 |