Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1763 ATGGCTGGTCTGGATTTAGGCACTGCTTCTCGCTTTGCTCAAAATTTTCACAGACCCGAGTTACACCTTCAGCGGCAGCAGCAGCAAACCGAATCCGAAGAAGATGCCAATCGAGCTGCCCACTTTTCCACAGAAGATGGTCCCCACCAAGGCCTTGAGCTCGCCTCCGCCTCCGCAGGTCCCGGTGACATCGTTGCCCGTCGATCCCGTGGTCGGCCTCCAGGTTCCAAGAACAAGCCCAAACCTCCCGTCATAATAACCAGAGAAAGCGCCAACACGCTCCGCGCTCATATTCTCGAAGTGGCCAACGGCTGCGACGTCTTTGAGTGCGTGGCCACCTATGCGCGCCGCCGCCAGCGGGGGATCTGTATCCTGAGTGGAAGTGGGACGGTTACCAATGTAAGTTTGAGGCAGCCGGCAGCGGCTGGAGCCATAGTGACCCTTCACGGAAGGTTCGAGATATTGTCGCTGTCGGGATCGTTCCTGCCGCCGCCTGCTCCGCCGGGTGCGACGAGCCTGACGATATACCTGGGGGGAGGGCAAGGACAAGTGGTGGGAGGGAGTGTGGTGGGTGAGTTGACGGCAGCGGGGCCGGTTATTGTGATCGCTTCCTCGTTTACGAACGTGGCGTACGAGAGGTTACCGTTGGAAGAGGAGGATCAGCTTCAGATACAGGCGTCTGCTTCCCAGGGATCCAGTGGAGGAGGTGGGAACCCATTCCCTGACCCATCATCGGCTCTCCCCTTCTTCAATTTGCCGCTTAATATGCAGAATGTTCAGTTGCCAATTGATGGGTGGGCGGGAAACTCAGCTCCACGTCCACCATTTTGA 831 0.5788 MAGLDLGTASRFAQNFHRPELHLQRQQQQTESEEDANRAAHFSTEDGPHQGLELASASAGPGDIVARRSRGRPPGSKNKPKPPVIITRESANTLRAHILEVANGCDVFECVATYARRRQRGICILSGSGTVTNVSLRQPAAAGAIVTLHGRFEILSLSGSFLPPPAPPGATSLTIYLGGGQGQVVGGSVVGELTAAGPVIVIASSFTNVAYERLPLEEEDQLQIQASASQGSSGGGGNPFPDPSSALPFFNLPLNMQNVQLPIDGWAGNSAPRPPF 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1763 276 MobiDBLite consensus disorder prediction 27 42 - -
Glsi05g1763 276 ProSiteProfiles PPC domain profile profile. 91 227 IPR005175 -
Glsi05g1763 276 MobiDBLite consensus disorder prediction 1 84 - -
Glsi05g1763 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 27 233 IPR014476 GO:0003680
Glsi05g1763 276 Gene3D - 94 231 - -
Glsi05g1763 276 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 208 IPR005175 -
Glsi05g1763 276 CDD DUF296 95 170 IPR005175 -
Glsi05g1763 276 FunFam AT-hook motif nuclear-localized protein 94 221 - -
Glsi05g1763 276 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1763 Glsi-ChrGlsi05 65437954 65438784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1763 1 276 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 66.113 8.82e-107 310