LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi05g1717	ATGGCGGCTTCCCTATCGCGCTCTTGCATTTCTCCTCACAATCCTCCGATATTTTCAAATTTCCATGTCCACAGTGAATTATGCTATCCTTCCTACTATTTCTATCCACAAGCAAAGGTACAAATTCGTTCCCTAAAACCCTTAGCTTTAGCCACCGATGCGGGATCTAAGCGCAATAAGGGAATCACAGCCAAATGCAATGTGTTTAGCGAAGAAGTGAGGGGGAGCGCGGAAGAGGAGAGCTACAGCACTGTGGAGGATAAGCAATTTGTGCGCTGGTTTCGTGAGGCCTGGCCTTACTTGTGGGCCCATAGAGGCGGCACCTTCGTTGTGATTATTTCCGGTGAAATTGTGGCTAGTCCTTTTTTAGATCCCATTCTCAAGGATATAGCTTTCCTTCATCAACTGGGAATCCGGTTTGTTATTGTTGCGGGGACCCATGTGCAAATAGACAAGCTTTTGACTGAGAGAGGGAGCCAGCCTAAGTATGTTGGTCGATATAGGATTACAGATGACGAATCTCTAGCTGCTGCAATGGAAGCAGCTGGGGGAATAAGATTGATGATAGAAGCAAAACTTTCTCCTGGACCTTCCATATGCAATATTCGTCGACATGGTGACAATAGTCGTTGGCATGAAGTTGGTGTCAGTGTTGCCAGTGGTAACTTTCTCGCAGCCAAGAGAAGAGGGGTTGTTGATGGAATTGACTATGGGTCAACTGGAGAAGTTAAAAAAGTTGATGTTTCTCGCATGCGTGAGAGGCTTGATGGTGGTTGTATAGTAATTTTAAGCAACCTGGGCTATTCCAGCTCTGGAGAAGTATTAAATTGCAACACCTATGAAGTTGCAACAGCTTGTGCCTTAGCTATTGGAGCAGACAAGCTTATTTGCATTATAGATGGTCCAATACTTGATGAGAGCGGACGCCTAATTCATTTCTTACCTCTTCAAGAAGCAGATTTGTTAATTCGTAAACGGGCTGAGCAAAGTGAAATAGCTGCTAACTATGTGAAAGCTGTTGATGAAGATGGTTTCAGCTCTTTTGGTTATAACAATTCTAATGGGGCAGTTCATTCTCCACAGAATGGAAAGGCTTTTAGCAGAAGCCATAATGCAACCTTTCATAATGGTGTTGGCTTTGACAATGGAAATGGCCTATGGTCTGGTGAACAAGGTTTTGCTATTGGAGGTCAGGAGCGGCTGAGTCGAATGAATGGTTATCTGTCGGAATTGGCTGCCGCAGCTTTTGTTTGCAGAGGAGGGGTTCAAAGAGTTCACCTGTTGGATGGCACAATTAGTGGAGTTTTGTTGCTGGAATTGTTTAAGAGAGACGGGATGGGAACGATGGTGGCCAGTGATCTATATGAAGGCACTCGGATGGCTCAGGTTACAGATCTTTCTGGAATAAAACAAATTATGCAGCCTTTGGAGGCATCTGGCATATTGGTTAAACGGACTGATGAAGAGTTGCTTCAATCATTGGATTCCTTCGTTGTTATGGAAAGAGAAGGGCAGATAATTGCTTGTGCTGCTCTTTTTCCTTTCTTTGAGGAGAAGTGTGGAGAGGTTGCTGCCATTGCAGTATCTCCTGACTGTCGAGGGCAAGGACAGGGTGACAAATTGCTTGATTATATTGAGAAGGCGGCTTCGTCTCTTGGGTTGAACATGCTTTTCCTGCTTACAACTCGTACTGCAGATTGGTTTGTGAGGCGTGGATTCTCAGAATGTTCAATTGATTATATACCAGAGAAAAGAAGGAAAAAAATCAATCTGTCCCGTAATTCGAAGTATTATATGAAGAAGCTTCTACCTGACAGAAGTGGAATTACCGTTGGTAGAAAATTTGCATCAGGTTAG	1857	0.4394	MAASLSRSCISPHNPPIFSNFHVHSELCYPSYYFYPQAKVQIRSLKPLALATDAGSKRNKGITAKCNVFSEEVRGSAEEESYSTVEDKQFVRWFREAWPYLWAHRGGTFVVIISGEIVASPFLDPILKDIAFLHQLGIRFVIVAGTHVQIDKLLTERGSQPKYVGRYRITDDESLAAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVDGIDYGSTGEVKKVDVSRMRERLDGGCIVILSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDESGRLIHFLPLQEADLLIRKRAEQSEIAANYVKAVDEDGFSSFGYNNSNGAVHSPQNGKAFSRSHNATFHNGVGFDNGNGLWSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDLSGIKQIMQPLEASGILVKRTDEELLQSLDSFVVMEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYIEKAASSLGLNMLFLLTTRTADWFVRRGFSECSIDYIPEKRRKKINLSRNSKYYMKKLLPDRSGITVGRKFASG	618

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi05g1717	618	Gene3D	-	88	455	IPR036393	-
	Glsi05g1717	618	Pfam	Acetyltransferase (GNAT) family	495	561	IPR000182	GO:0016747
	Glsi05g1717	618	SUPERFAMILY	Acyl-CoA N-acyltransferases (Nat)	459	605	IPR016181	-
	Glsi05g1717	618	SUPERFAMILY	Carbamate kinase-like	88	324	IPR036393	-
	Glsi05g1717	618	PANTHER	AMINO-ACID ACETYLTRANSFERASE	56	610	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Glsi05g1717	618	CDD	AAK_NAGS-ABP	89	450	IPR033719	-
	Glsi05g1717	618	Gene3D	-	456	602	-	-
	Glsi05g1717	618	Hamap	Amino-acid acetyltransferase [argA].	83	602	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Glsi05g1717	618	CDD	NAT_SF	497	559	-	-
	Glsi05g1717	618	NCBIfam	amino-acid N-acetyltransferase	411	602	IPR010167	GO:0004042\|GO:0005737\|GO:0006526
	Glsi05g1717	618	ProSiteProfiles	Gcn5-related N-acetyltransferase (GNAT) domain profile.	456	604	IPR000182	GO:0016747
	Glsi05g1717	618	Pfam	Amino acid kinase family	109	319	IPR001048	-
	Glsi05g1717	618	SUPERFAMILY	Carbamate kinase-like	404	452	IPR036393	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi05g1717	Glsi-ChrGlsi05	65077330	65083921	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	GNAT	Glsi05g1717		AA_kinase	2.1e-11	No_clan

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Glsi05g1717	05	65077330	65083921	Glsi09g0358	09	2500123	2504915	CCT