Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1712 ATGGACACCTTGTTTAGGCTAGTCAATTTTCAACAACAACCTGATCAATCCCTCAACTCCACCAGTAGAACTTCTAGTAGCTCTAGATCCTCCAGACAAAACTATCACTACCACCAACAAGACGAAGAATGCTTCAAATTTTTCATGGATGAAGAAGACTTATCCTCGTCTTCTTCTAAGCACTACTATCCTTATGAGCCCCACCCCTCCACCACCACCACCACCACCCCCACCCCAACCCCTAACACCAGCACCCCCACCACCACTGATTTCTCCTTTTCACCCACCCGTGACTTCAACTTCGACTTCTCCGGCAAGTGGGCTCCTGATATCCTCCTCGAAACAGCACGTGCCATTGCCGACAAGAACAGCCCTCGTGTCCAGCAACTCATGTGGATGCTCAATGAGCTCAGCTCCCCTTATGGTGACCCCGATCAAAAACTCGCCGCTTACTTTCTCCAAGCCTTGTTTAGTCGCATGACTGACTCCGGGGACCGTACTTACCGTACCTTAACCTCCGCCTCGGAGAAAACCTGCTCCTTCGAATCAACCAGGAAGATGGTCTTGAAGTTCCAAGAGGTCAGTCCTTGGACAACTTTCGGTCATGTCGCTTGCAATGGTGCTATCTTGGAAGCCTTCGAAGGGGAACCTAAGTTACATATTGTTGATATTAGCAATACGTATTGCACCCAGTGGCCCACCCTGCTCGAAGCCTTGGCCACTCGCAGCGACGAGACCCCACAACTCCGTTTAACCACAGTGGTGACCAGCAGAGCCGGAACTTCCGTCGCGGCAATTCAAAAGGTCATGAAGGAAATAGGTACTAGAATGGAGAAATTTGCAAGGCTTATGGGTGTACCCTTTAAATTCAATGCCATCCATCATACAGGTAATCTTTCGGACTTCAACTTTGCGGAATTAGACATTAAAGACGACGAGGCTTTAGCTATCAACTGTGTGAATGCTTTGCACTCAGTCACAGTCGTTGATAATCACCGTGACATGTTGATATCTTCGTTTCGGAGATTACAACCTAGGCTAATCACTGTGGTGGAAGAAGAAGCTGATCTTGATGTGGGTTTCGATGGGTTTGAGTTTTTGAAGGGATTTCAAGAATGCTTGAGATGGTTTAGGGTTTATTTTGAGGCATTGGAGGAGAGTTTCCAAAGGACGAGCAACGAGAGGTTGATGCTTGAACGAGCAGCAGGACGAGCCATCGTTGACTTGGTGGCTTGTACTCCATCGGAGTCGACTGAGAGGCGTGAGTCGGCGGCGCGATGGTCGCAGCGTCTGCATGGTAGTGGGTTTAACGCAGTGTCGTTTAGCGACGAAGTTTGTGACGATGTGAAAGCACTACTGAGAAGGTACAAGGAGGGTTGGTCAATGACACAGTGCCCCGACGCCGGAATATTCTTGTCGTGGAAGAACCAGCCGGTGGTGTGGGCCAGTGCATGGAGGCCTTGA 1464 0.4945 MDTLFRLVNFQQQPDQSLNSTSRTSSSSRSSRQNYHYHQQDEECFKFFMDEEDLSSSSSKHYYPYEPHPSTTTTTTPTPTPNTSTPTTTDFSFSPTRDFNFDFSGKWAPDILLETARAIADKNSPRVQQLMWMLNELSSPYGDPDQKLAAYFLQALFSRMTDSGDRTYRTLTSASEKTCSFESTRKMVLKFQEVSPWTTFGHVACNGAILEAFEGEPKLHIVDISNTYCTQWPTLLEALATRSDETPQLRLTTVVTSRAGTSVAAIQKVMKEIGTRMEKFARLMGVPFKFNAIHHTGNLSDFNFAELDIKDDEALAINCVNALHSVTVVDNHRDMLISSFRRLQPRLITVVEEEADLDVGFDGFEFLKGFQECLRWFRVYFEALEESFQRTSNERLMLERAAGRAIVDLVACTPSESTERRESAARWSQRLHGSGFNAVSFSDEVCDDVKALLRRYKEGWSMTQCPDAGIFLSWKNQPVVWASAWRP 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1712 487 MobiDBLite consensus disorder prediction 1 34 - -
Glsi05g1712 487 Pfam GRAS domain family 111 486 IPR005202 -
Glsi05g1712 487 ProSiteProfiles GRAS family profile. 99 486 IPR005202 -
Glsi05g1712 487 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 110 479 IPR005202 -
Glsi05g1712 487 MobiDBLite consensus disorder prediction 1 35 - -
Glsi05g1712 487 MobiDBLite consensus disorder prediction 58 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1712 Glsi-ChrGlsi05 65049124 65050587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1712 1 487 GRAS Transcription Factor Family AT4G37650 61.466 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi05g1712 GRAS 1.7e-106 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1712 05 65049124 65050587 Glsi05g1712 05 65049124 65050587 ECH