Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1710 ATGGAATCAAGGACACATAAGACAAACCCTAATTACTCTCTGTCGTTGCCGTCCCGAAGCAGAGGCAAGGAGAAAGCAGCAGCAGAGCCCTATTCTCCTCAGAGAGCGAAAATGAAGTACAATCCCAGGGTCTCAAGCTCTCGTCGCAAGAACCGCAAGGCCCATTTCACGGCGCCGTCGAGCGTTCGTCGTATTTTGATGAGCGCGCCGCTGTCGAACGATCTCCGCTCCAAGTACAATGTGCGGTCCATGCCGGTTCGCAAGGACGATGAGGTGCAAGTTGTTCGTGGTACCTACAAGGGACGTGAGGGTAAGGTGGTTCAGGTTTATCGCCGTAAATGGGTCATCCATATCGAGCGTATTACCCGTGAGAAGGTAAATGGGTCGACAGTGAATGTTGGAATTAACCCTTCTAAAGTTGTCATCACGAAGCTGAGGTTGGATAAGGACCGCAAGTCCTTGCTTGATCGCAAAGCCAAGGGACGTGCGGCGGCCGACAAGGTTAAGGGCACCAAGTTCACTGCCGAGGACATTATGCAAAGTATTGATTAG 552 0.5163 MESRTHKTNPNYSLSLPSRSRGKEKAAAEPYSPQRAKMKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSNDLRSKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDRKAKGRAAADKVKGTKFTAEDIMQSID 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1710 183 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 38 178 IPR005756 GO:0003735|GO:0006412|GO:0015934
Glsi05g1710 183 MobiDBLite consensus disorder prediction 1 61 - -
Glsi05g1710 183 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 45 158 IPR005756 GO:0003735|GO:0006412|GO:0015934
Glsi05g1710 183 Pfam KOW motif 88 119 IPR005824 -
Glsi05g1710 183 CDD KOW_RPL26 89 142 IPR041988 GO:0003723
Glsi05g1710 183 NCBIfam 50S ribosomal protein L24 45 159 IPR005756 GO:0003735|GO:0006412|GO:0015934
Glsi05g1710 183 SUPERFAMILY Translation proteins SH3-like domain 45 162 IPR008991 -
Glsi05g1710 183 ProSitePatterns Ribosomal protein L24 signature. 89 106 IPR005825 GO:0003735|GO:0005840|GO:0006412
Glsi05g1710 183 FunFam 60S ribosomal protein L26 38 181 - -
Glsi05g1710 183 Gene3D - 38 180 IPR014722 -
Glsi05g1710 183 Hamap 50S ribosomal protein L24 [rplX]. 32 158 IPR005756 GO:0003735|GO:0006412|GO:0015934
Glsi05g1710 183 MobiDBLite consensus disorder prediction 42 57 - -
Glsi05g1710 183 MobiDBLite consensus disorder prediction 1 18 - -
Glsi05g1710 183 SMART kow_9 85 112 IPR005824 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1710 Glsi-ChrGlsi05 65037986 65039024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1710 38 183 Cytoplasmic Ribosomal Protein Gene Family AT3G49910 87.671 2.42e-94 269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1710 05 65037986 65039024 Glsi05g1710 05 65037986 65039024 ECH