Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1705 ATGGAGAGCTCTGACACTTCTTTTTCTTCATCCAGCCTTTTGTGTGATGAAGATGACTCTAGCCTGTTGACAGGCGACGACGTTGAAATGATTGGCCCCGGCTCAACGAACCGAGGTTTGATTTTGGAGGATGATGACCAATACATTGAGACTTTGTTTGAAAGAGAAATGGAATTTGCACTCGAGGGTCGTGATTTCTCAAGCACAGCCAGAATCTGGTTGAAGAGTGCCCGTCTTGATGCAATTGACTGGATGTTCAGTACGCGGGCAAAGTTTGGGTTCAAATTGCACACGGTTTATTTATCGGTGACTTACTTTGATCGCTTTCTTTCTAAGCGATCCATCGATCCACGAGAACTTGGGAGTGTTCAAATACTATCAGTGGGATGTTTATCTTTGGCGGCAAAGATGGAAGAGCAAAAGACGCCGAGTCTTTCCCAGTATTCGGTAGAACAATATCACTTTGAGAACAACAAAATTAAGGATATGGAGCTAATGATTTTGAGTGATTTGGAATGGAAAATGGGATCCGCAACTCCTTTTGCTTATCTGCATTACTTTGTCAACAAGTTCTGTGGCGAATCTAGACAAGAAGTGATAGTCCCAAGAGCCATGGAGCATATTATAGCCATTGTAAAAGACATTAATTTGGTCGAACACCGGCCATCTATTATTGCCTCGGCTGCTATATTGGCAGCTTTTGATGATACATTAACCAGAAACTCTATGGATCTTCATATAAGCGTAATCTCATCGTATGGACCTCCAGAAAGTGGAAAAGGAGGAAGAAAATCCAGTACTCCTGCCTCAGATTTGTTGGCAACCCATTCGAGCTCTGCAGGTGTTCTTGGGAATTCCTCTCGCACTGCTTCTGGAGCTAAGAGACAGCTTAGTTTTGGGGAGAGTGAAGATTGTCCAGAATTATATTTTAGCAAGCATGTATACAGTATACACTATAGAACACCATCAATCCTACCCTTTGATGGGGAGCTTGGGATGCTTCCTATGTCTTTGAAAAGTTTGCAAAACTGGGGCATTGAGAAACTGGCAAAGTCGAATGTGATTATCTTTGCTTGGGACGTGGGAGACTCGTTTTGA 1098 0.429 MESSDTSFSSSSLLCDEDDSSLLTGDDVEMIGPGSTNRGLILEDDDQYIETLFEREMEFALEGRDFSSTARIWLKSARLDAIDWMFSTRAKFGFKLHTVYLSVTYFDRFLSKRSIDPRELGSVQILSVGCLSLAAKMEEQKTPSLSQYSVEQYHFENNKIKDMELMILSDLEWKMGSATPFAYLHYFVNKFCGESRQEVIVPRAMEHIIAIVKDINLVEHRPSIIASAAILAAFDDTLTRNSMDLHISVISSYGPPESGKGGRKSSTPASDLLATHSSSAGVLGNSSRTASGAKRQLSFGESEDCPELYFSKHVYSIHYRTPSILPFDGELGMLPMSLKSLQNWGIEKLAKSNVIIFAWDVGDSF 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1705 365 SMART cyclin_7 83 169 IPR013763 -
Glsi05g1705 365 PANTHER CYCLINS 46 239 IPR039361 -
Glsi05g1705 365 Pfam Cyclin, N-terminal domain 50 175 IPR006671 -
Glsi05g1705 365 SUPERFAMILY Cyclin-like 39 175 IPR036915 -
Glsi05g1705 365 Gene3D - 62 176 - -
Glsi05g1705 365 ProSitePatterns Cyclins signature. 78 109 IPR006671 -
Glsi05g1705 365 Gene3D - 49 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1705 Glsi-ChrGlsi05 65014241 65016184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1705 13 228 Core Cell Cycle Gene Families AT4G37630 36.000 7.40e-39 137