Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1703 ATGAATAATTCACCACCGAGAGGACGCAGCTATGTTTCTATAGCAACAATAGATTTGTGGGAGCGTCTATTTGATGAAGGTTATAAGGCAGACGTTTACATTAATACTGATAATGGTGGCATTATTTATGCGCATTCTAACATTCTTGCTATGTCATCTCCCGTGATGAGAGGCATGCTAAAGCGAGCAAGTCGCCGTCATCAAATGCAATCAATCTCAATTTCTGGGGTACCACATGACGCAGTTCGAGTTTTCATTCGGTTCTTGTATAGTTCCTGTTACGAGAAAGAAGAAATGAAGGAATTCGTCTTGCATTTGTTGGTGCTGTCACATGTATTTGTGGTTCCCCACTTGAAGCGTGAATGTGAACGGAAGCTAGAACTGGATTTACTCACCATAGACAATGTAGTTGATGTATTTCAACTTGCATTACTGTGTGATGCTCCCCGCCTTAGCCTCGTTTGTCACCGCATGATCCTAAAAAATTTTAAAGTAGTTTCGGAGTCTGAAGGGTGGAAAATTATGAAAAAGAGCCACCCAATTCTAGAAAAGGAACTTCTGGAGTCTCTGATTGAGGAAGAAAATAGCACAAAGGAGAGGATCAGAAAAATTAATGAGAGGAAAATTTATCTTCAATTATACGAGGCAATGGAAGCTCTTGTTCACATATGTAGAGATGGTTGTCGAACCATTGGCCCACACGATAAAGACTTCAAAGCAAACCAAGCGCCTTGTAGATTTGCCGCGTGCAAGGGCCTAGAATTGCTCGTCCGTCATTTTGCTGGCTGCAAGTTGAGAGTCCCAGGTGGCTGCAATCATTGCAAGAGGATGTGGCAACTATTGGAGCTACACTCTCGACTCTGTGCTGATCCAGATATTTGTAGAGTTCCTTTATGCAGGAACTTTAAGGTGAGAATGTCAATACAAAGCAAGAAAGATGAAATTAGGTGGACAATACTGGTCGAAAAGATCTTGAGAACAAAGGGCATCGCGGTAGCACCATTCTTTCACAGGCAATAA 1020 0.4196 MNNSPPRGRSYVSIATIDLWERLFDEGYKADVYINTDNGGIIYAHSNILAMSSPVMRGMLKRASRRHQMQSISISGVPHDAVRVFIRFLYSSCYEKEEMKEFVLHLLVLSHVFVVPHLKRECERKLELDLLTIDNVVDVFQLALLCDAPRLSLVCHRMILKNFKVVSESEGWKIMKKSHPILEKELLESLIEEENSTKERIRKINERKIYLQLYEAMEALVHICRDGCRTIGPHDKDFKANQAPCRFAACKGLELLVRHFAGCKLRVPGGCNHCKRMWQLLELHSRLCADPDICRVPLCRNFKVRMSIQSKKDEIRWTILVEKILRTKGIAVAPFFHRQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1703 339 CDD BACK 132 173 - -
Glsi05g1703 339 Gene3D - 132 205 - -
Glsi05g1703 339 ProSiteProfiles BTB domain profile. 30 98 IPR000210 GO:0005515
Glsi05g1703 339 Pfam TAZ zinc finger 214 299 IPR000197 -
Glsi05g1703 339 Pfam BTB/POZ domain 22 127 IPR000210 GO:0005515
Glsi05g1703 339 SUPERFAMILY POZ domain 16 126 IPR011333 -
Glsi05g1703 339 Coils Coil 187 207 - -
Glsi05g1703 339 FunFam BTB/POZ and TAZ domain-containing protein 2 204 329 - -
Glsi05g1703 339 ProSiteProfiles Zinc finger TAZ-type profile. 204 302 IPR000197 -
Glsi05g1703 339 SUPERFAMILY TAZ domain 207 307 IPR035898 -
Glsi05g1703 339 Gene3D Potassium Channel Kv1.1; Chain A 12 131 IPR011333 -
Glsi05g1703 339 SMART BTB_4 30 130 IPR000210 GO:0005515
Glsi05g1703 339 SMART TAZ_2 207 300 IPR000197 -
Glsi05g1703 339 Gene3D TAZ domain 206 327 IPR035898 -
Glsi05g1703 339 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 10 333 IPR044513 -
Glsi05g1703 339 FunFam BTB/POZ and TAZ domain-containing protein 2 132 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1703 Glsi-ChrGlsi05 65005191 65007516 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Glsi05g1703 BTB 7.2e-14 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1703 05 65005191 65007516 Glsi05g1703 05 65005191 65007516 ECH