Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1702 ATGACGGAAGCTGTTTCAGCGTCCAGATCTTGCAGCCAGAAGAAGTTTCGTCACTCTGTCTCTCTCTCTCTCTCTCGTCTTTCGAGCAAGGGACTTGCGGAAGCAAAAACCAGAGATGAATTGGGCGAGACAAATGGGAATAAGCGAAACCCAGGAAAATTCACCATGAAAGCTCATCATTTGAGCTTCTTTTTTATCATCTCATTGTCTCTATCCGTCCTAGTCCCCACTGCGAAAGGGGTCAACACCATTCCATTCCGCACTGTCAACGAATCTCAGACAAGAAGAATTCTGCACCAACCGTTGTTTCCGGCGACTTCTGCTCCACCACCAGGCACCGAACCACCTCCATCACCACCATCGCCACCGTACCCAACTCCACCTTCTCCCGATACCGACATTCCTTTCTTTCATGAGTATCCAGCCGGGCCACCGGCGGATCAGAATCAGCCACCACCTTCCATTTCCAATGGCACAATTGCCAACCCAACAGCAACACAGCCAACCAAGCCCACAAAGAAGGTCGCAATTGCCATCTCTGTTGGAATTGTCACGCTTGGCATGCTCTCCGCCCTTGCCTTCTTCTTGTACAAGCACCGAGTGAAACACCCCATCGAGACCCAGAAGCTCGTTGGTGGCAATTCCAACAGGATCCCTGACGATTCAAGGGCGCCACCATCGAGCTTTCTCTACATTGGAACGGTAGAGCCAAGCCGAACATCAGTGAGTGAGCCAAGTCAAGTCAATGGAGCAAACAGGTCACCTTATCACAAGCTGAATTCTATTAAGCGATCTGAACGATACCGTCCCAGTCCTGAATTGCAGCCATTGCCGCCGTTAAGTAAGCCCCCAGATGGGAATTACCCACCGGCAGTGTCTTCGTCGTCCTCGGACGAGGAAAGCCACGAGACGATATTTCATTCGCCGCAGGGCTCATCACTCAGTTACGAGGACAGCTATTACACACCAATTTCGCGTCATAGTTCTCTGGCTAATGGTGGCCCGGCGGCACCTGCCAGGATTGAGGCCCATTCCACAACTTCGGTCCCCTATTCAAAGAGAACTTCACCAAAATCTTGGCTTTCCGCTTCATCGCCGGATATTAGGCATGTCATCATACCATCAATAAAGCAGGCTCCACCTGCGCCTGCACCTCCTCCTCCTCCACCGCTACCACCTTCACAATTGACTTCGGGTCCTTCCAGAAGGCCGAAATACTCTGCGCCTCCACCAGCACCTAATTTGACGCATCTTCAGTCAACAAAAAACTCACCCCCTAACGTACCTAGGACTTCACTCAATCCTCCTCCTCCCCCTCCGCCGCCGCCTCCACCACGGCAATCAACGCCACTGAAAGCAGGGTCACCGGCAATCAGCGTTTCCTCATCCTCTGCATTAAGACATCAACAATCTTGGTCTCCAAGCCAAGGAGCCGCTTCTGCTAATAGTATAACAAAAGCTTCAGAGCATGGTGATAAAAGTCTCAGCTCTTCCGAGAGGCTTGAAGCCGATGACACGGATGGAGCGAAACCCAAGTTAAAGGCTTTGCATTGGGACAAAGTCCGTGCGACCTCAGACCGCGCCACAGTTTGGGACCAGCTAAAATCAAGCTCATTTCAATTAAATGAGGACATGATGGAGACCCTGTTTGGCTGCAATTCCGCCAATTCCGTCCCAAAAGAACCTAACAAAAAATCAGTCCTTCCCCCTGTTGAAAAGGAGAACAGAGTGCTAGACGCGAAGAAGTCCCAAAACATAGCTATACTGCTAAGGGCACTGAATGTGACAAGAGATGAGGTATCCGACGCCCTTCTAGATGGGAATCCTGAAGGTTTGGGTGCTGAGCTTTTGGAAACTCTAGTAAAGATGGCTCCCACTAAGGAGGAAGAAATAAAACTTAAGAACTACAGTGGTAACCTCTCCAAACTTGGGTCTGCCGAAAGATTTCTTAAACAAGTGCTTGATATCCCTTTTGCCTTCAAGAGAGTTGAAGCCATGCTATACAGAGCTAACTTTGACACGGAAGTTAATTACCTGAGGAAGTCTTTTCAAACCCTTGAGGCAGCAAGTGAGGAGTTAAAAAACAGCCGGTTGTTCCTCAAACTCCTTGAAGCTGTTCTCAGGACAGGAAACAGGATGAATGTGGGCACCAATCGTGGTGATGCTAAAGCTTTTAAGCTGGACACACTCTTAAAACTTGTGGACATAAAGGGAACGGATGGAAAGACTACATTGCTTCACTTTGTGGTTCAAGAGATCATTAGATCCGAAGGTGCAAGCAGTGATTCTGCAAACGATAATGCTCAGAACCAAATGAATTCCAAATTCAACGAGGATGAGTTCAAGAAGCAAGGATTGCCGGTTGTGGCTGGGCTCAGTAGAGATCTCAGCAATGTTAAAAAAGCAGCAGGAATGGACTCAGATGTCTTGAGCAGCTATCTCTCAAAGCTGGAAATGGGTCTTGATAAAGTGAGACTGGTTTTGCAATATGAGAAACCAGACATGCAAGGGAATTTCTTTCACTCCACGAAGCTATTTCTGAAAGATGCTGAAGAGGAAATTGTTAGAATTAAGGCTGATGAAAGAAAGGCTTTATTCCTAGTGAAAGAAGTTACAGAATACTTTCATGGGAATGCAGCCAAGGAAGAAGCTCACCCTTTAAGAATCTTTATGGTTGTAAGAGACTTTCTAAATATTTTGGATCAAGTGTGCAAAGAAGTGGGAAGGTTGCAGGATAGAGCTGTGGTTGGTTCTGCCAGATCCTTCCGTATAGCTGCAAGTGCATCATTACCTGTTCTCAACAGGTACAATGCGAAACAAGATAGAAGCTCAGATGAGGAAAGCTTGTCACCCTAG 2856 0.4783 MTEAVSASRSCSQKKFRHSVSLSLSRLSSKGLAEAKTRDELGETNGNKRNPGKFTMKAHHLSFFFIISLSLSVLVPTAKGVNTIPFRTVNESQTRRILHQPLFPATSAPPPGTEPPPSPPSPPYPTPPSPDTDIPFFHEYPAGPPADQNQPPPSISNGTIANPTATQPTKPTKKVAIAISVGIVTLGMLSALAFFLYKHRVKHPIETQKLVGGNSNRIPDDSRAPPSSFLYIGTVEPSRTSVSEPSQVNGANRSPYHKLNSIKRSERYRPSPELQPLPPLSKPPDGNYPPAVSSSSSDEESHETIFHSPQGSSLSYEDSYYTPISRHSSLANGGPAAPARIEAHSTTSVPYSKRTSPKSWLSASSPDIRHVIIPSIKQAPPAPAPPPPPPLPPSQLTSGPSRRPKYSAPPPAPNLTHLQSTKNSPPNVPRTSLNPPPPPPPPPPPRQSTPLKAGSPAISVSSSSALRHQQSWSPSQGAASANSITKASEHGDKSLSSSERLEADDTDGAKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGCNSANSVPKEPNKKSVLPPVEKENRVLDAKKSQNIAILLRALNVTRDEVSDALLDGNPEGLGAELLETLVKMAPTKEEEIKLKNYSGNLSKLGSAERFLKQVLDIPFAFKRVEAMLYRANFDTEVNYLRKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGASSDSANDNAQNQMNSKFNEDEFKKQGLPVVAGLSRDLSNVKKAAGMDSDVLSSYLSKLEMGLDKVRLVLQYEKPDMQGNFFHSTKLFLKDAEEEIVRIKADERKALFLVKEVTEYFHGNAAKEEAHPLRIFMVVRDFLNILDQVCKEVGRLQDRAVVGSARSFRIAASASLPVLNRYNAKQDRSSDEESLSP 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1702 951 SUPERFAMILY Formin homology 2 domain (FH2 domain) 435 913 - -
Glsi05g1702 951 MobiDBLite consensus disorder prediction 413 428 - -
Glsi05g1702 951 MobiDBLite consensus disorder prediction 452 491 - -
Glsi05g1702 951 Pfam Formin Homology 2 Domain 506 900 IPR015425 -
Glsi05g1702 951 PANTHER FORMIN-RELATED 63 945 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Glsi05g1702 951 MobiDBLite consensus disorder prediction 306 329 - -
Glsi05g1702 951 SMART it6_source 503 915 IPR015425 -
Glsi05g1702 951 MobiDBLite consensus disorder prediction 492 508 - -
Glsi05g1702 951 MobiDBLite consensus disorder prediction 104 134 - -
Glsi05g1702 951 Gene3D Formin, FH2 domain 498 911 IPR042201 -
Glsi05g1702 951 MobiDBLite consensus disorder prediction 152 171 - -
Glsi05g1702 951 MobiDBLite consensus disorder prediction 27 53 - -
Glsi05g1702 951 MobiDBLite consensus disorder prediction 210 508 - -
Glsi05g1702 951 ProSiteProfiles Formin homology-2 (FH2) domain profile. 503 926 IPR015425 -
Glsi05g1702 951 MobiDBLite consensus disorder prediction 429 450 - -
Glsi05g1702 951 MobiDBLite consensus disorder prediction 272 286 - -
Glsi05g1702 951 MobiDBLite consensus disorder prediction 102 171 - -
Glsi05g1702 951 MobiDBLite consensus disorder prediction 378 397 - -
Glsi05g1702 951 MobiDBLite consensus disorder prediction 32 46 - -
Glsi05g1702 951 MobiDBLite consensus disorder prediction 345 363 - -
Glsi05g1702 951 MobiDBLite consensus disorder prediction 233 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1702 Glsi-ChrGlsi05 64998429 65002499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1702 485 941 FH2 protein (formin) Gene Family AT5G67470 73.970 0.0 669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1702 05 64998429 65002499 Glsi05g1702 05 64998429 65002499 ECH