Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1697 ATGCTCGCTCGCAAAGACGACGCGAAGTTTCTTTGCTATACTTGGGAATCTTCCCTTCTATTTGCGCTTTTCCATTTAAGATTAGACTGTGAGTTCATTGGAAATATGGGAGAGGAGTTTGGTTCGGTGGTAGTGAGAGAATTCGACCCAAATAAAGACAGAGGAGGAGTGGAAGGCGTAGAAAGAATATGTGAGGTTGGACCCAGCGGGAAGCTCTCCCTCTTTACCGACCTCATGGGTGATCCAATTTGCAGGGTCCGCCACTCGCCTGCTTTCCGCATGCTGGTGGCTGAGATTGGCCAAGAGATTGTAGGAATGATAAGGGGCTGCATCAAAACCGTTACATGCGGAAAGAGGCTATCCAGAAATGGAAAGAATCCCGACTTCACTAACAACAACGAAGACACCTTCCAAGCCACTGCCAAACACGTCCCTGTATACACCAAACTCGCGTACATTTTAGGCCTTCGCGTTTCGCCCGCTCACCGGAGAATGGGAATAGGGTTGAAGCTGGTGCATAGTATGGAGGAGTGGTTCGGAGCTAACGGGGCTGAATACTCGTATGTAGCGACGGAAAACGACAATTTAGCATCCGTTAAGCTCTTTACCGACAAATGCGGATACTCAAAGTTCCGTACCCCCTCCATCCTTGTCAACCCCGTTTTCGCTCATTCAGCGAAGGTCTCCCACAAGGTTGCCATCATCCGACTCAACCCCTCCGATGCCGAATGCCTCTATCGCCGCCGCTTCGCCACCACCGAGTTCTTCCCCCGCGACATTGACTCTGTCCTCAACAACAAACTCAGCCTTGGCACCTTCCTCGCCGTCCCGTGTGGGTCCTACCGTGCCGAGACGTGGCCCGGGTCCGATCGCTTCCTGTCGGACCCACCAAAGTCCTGGTCAGTGCTCAGCGTCTGGAACTGCAAGGACGTGTTCACGCTCGAGGTCCGGGGCGCATCGCGCGTGAAGCGCATCCTTGCGAAAACGACCCGAATATTGGACCGGGCCTTCCCGTGGCTGCGACTACCGTCGATTCCGAATTTCTTCAGCCCTTTCGGGTTCCACTTCATGTACGGGCTGGGAGGTGAAGGCCCAGAAGCGGTGAAGATGGTCAAGGCCTTGTGTGGATTCGCACACAACCTGGCCAAGGAACGTGGGTGCGGGGCAGTGGCGACGGAGGTGTCCAGCCGCGAACCGCTCAGGTTTGGGATACCACACTGGAAGAAGCTGTCTTGCGCCGAGGATTTATGGTGCATCAAAAGGCTCGGAGAAGACTACAGCGACGGCTCTGTCGGTGACTGGACGAAATCTCCTCCCGGATGGTCCATTTTTGTTGACCCCAGAGAGTTCTAA 1353 0.5432 MLARKDDAKFLCYTWESSLLFALFHLRLDCEFIGNMGEEFGSVVVREFDPNKDRGGVEGVERICEVGPSGKLSLFTDLMGDPICRVRHSPAFRMLVAEIGQEIVGMIRGCIKTVTCGKRLSRNGKNPDFTNNNEDTFQATAKHVPVYTKLAYILGLRVSPAHRRMGIGLKLVHSMEEWFGANGAEYSYVATENDNLASVKLFTDKCGYSKFRTPSILVNPVFAHSAKVSHKVAIIRLNPSDAECLYRRRFATTEFFPRDIDSVLNNKLSLGTFLAVPCGSYRAETWPGSDRFLSDPPKSWSVLSVWNCKDVFTLEVRGASRVKRILAKTTRILDRAFPWLRLPSIPNFFSPFGFHFMYGLGGEGPEAVKMVKALCGFAHNLAKERGCGAVATEVSSREPLRFGIPHWKKLSCAEDLWCIKRLGEDYSDGSVGDWTKSPPGWSIFVDPREF 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1697 450 Gene3D - 82 214 - -
Glsi05g1697 450 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 86 210 IPR016181 -
Glsi05g1697 450 FunFam Probable N-acetyltransferase HLS1-like 52 215 - -
Glsi05g1697 450 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 43 238 IPR000182 GO:0016747
Glsi05g1697 450 CDD NAT_SF 94 189 - -
Glsi05g1697 450 Pfam Acetyltransferase (GNAT) family 90 208 IPR000182 GO:0016747
Glsi05g1697 450 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 41 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1697 Glsi-ChrGlsi05 64962668 64966142 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Glsi05g1697 Acetyltransf_1 3.2e-16 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1697 05 64962668 64966142 Glsi09g0375 09 2578668 2580358 CCT
Glsi05g1697 05 64962668 64966142 Glsi05g1697 05 64962668 64966142 ECH