Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1690 ATGACGCAATTCACACTACCACCTTTGCACCAAATCATTCCCTTTCCCATGAACAAAAATCAATTTCCTAGGACAAGACCCATATCGAAGGGGTTCGGTAGCTTCGGCGATGCCAATTGCATGGAACAGTTACTTGTTCACTGTGCTGACGCCATCGAAAACAACAATGTAACTCTTGCCCAACAAATCCTGTGGGTGTTGAACAACATGGCATCCCCAGATGGCGACTCCAATCAGCGCCTAGCCTCTAGCTTCCTTCGCGCCCTCACCGCACGCGCCGCCAAAACTGGAAGCTGGAAAATGCTAGCTGCCGTCGCAGACGCTCATACCAATCTTCCTCCTATAGACACCCACAAGTTCTCCGTCGTCGAGCTGGCCAACTTCGTTGACTTAACCCCTTGGCACCGCTTCGGTTTCACCGCAGCTAATGCTGCCATTTTACAAGTTACCCAAGATTACTCTGTCATCCATATCGTCGACTTAAGCTCTACACTTTGCATGCAGATTCCTACACTCATTGACGCCATTGCTTCCCGCCACGAGGTCTCTCCTCTTATCAAGCTCACCGTAGCTTCTTCCACCAGAGATATCCCGCCTATGCTTGACCTTTCCTACGACGAATTGGGTACCAAGTTGGTCAATTTCGCCAGGTCTAAGAACGTAATGATGGAATTTAGAGTGGTTTCTTCTACTTACACAGATGGGTTCGCCGCTCTAATCGAACACCTTCGGGTGCAACACTTGGTTTTCGCAGCAGAAGGGCATCGAAGGGAAGCTTTGGTTATAAACTGTCAGATGATGCTTCATTATATTCCTGACGAAACCCTATCTTATATGTATGATTCTTGTGCTACTACTGCGTCTTCTACTTCGTCCCTGCGATCGATGTTTCTCAAAGCTCTTCGGAGTTTAGACCCAACGATTGTCGTTTTAGTAGATGAAGATGCAGATTTGACATCGAACAACCTGGTTTGCAGACTGAGGTCTGCGTTTAATTACCTATGGATACCATACGACACAGTGGACACGTTTCTTCCACGAGGGAGTATACAAAGGCAGTGGTACGAAGCTGATATATGCTGGAAGATTGAGAATGTGATAGCTCACGAAGGGCTTCAGAGGGTTGAGAGGGTTGAGCCTAAAAGCAAGTGGGAGCAACGGTTGAGAAATGCCAACTTTCAGGGGATTGGGTTCAGTGAGGATGCGGTTTCGGAGGTGAAGGGAATGCTTGATGAACATGCAGCCGGATGGGGGTTGAAGAAGGAAGATCAACATCTTGTGCTCACTTGGAAAGGACACAATGTAGTCTTTGCCTCTGCTTGGTTTCCAGCTTGA 1335 0.4787 MTQFTLPPLHQIIPFPMNKNQFPRTRPISKGFGSFGDANCMEQLLVHCADAIENNNVTLAQQILWVLNNMASPDGDSNQRLASSFLRALTARAAKTGSWKMLAAVADAHTNLPPIDTHKFSVVELANFVDLTPWHRFGFTAANAAILQVTQDYSVIHIVDLSSTLCMQIPTLIDAIASRHEVSPLIKLTVASSTRDIPPMLDLSYDELGTKLVNFARSKNVMMEFRVVSSTYTDGFAALIEHLRVQHLVFAAEGHRREALVINCQMMLHYIPDETLSYMYDSCATTASSTSSLRSMFLKALRSLDPTIVVLVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSIQRQWYEADICWKIENVIAHEGLQRVERVEPKSKWEQRLRNANFQGIGFSEDAVSEVKGMLDEHAAGWGLKKEDQHLVLTWKGHNVVFASAWFPA 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1690 444 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 431 IPR005202 -
Glsi05g1690 444 ProSiteProfiles GRAS family profile. 32 442 IPR005202 -
Glsi05g1690 444 Pfam GRAS domain family 41 441 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1690 Glsi-ChrGlsi05 64920611 64921945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1690 17 443 GRAS Transcription Factor Family AT3G49950 58.102 1.36e-171 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi05g1690 GRAS 1.1e-89 CL0063