Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1688 ATGGCAGCAACCAGTGAACTATATCCACAAGAGACGCAGAAACAAGCCCATCATATTTTGCCGGCTTCATGGGCAATGGGTTTTCCTGATTGGGAACTGGAGACTAGAGTCATTGGGCCTAGTAGTTCTAGTAAGGCAGAAGTTAACACTAGTATAGCATTATCAACTGAACAGTTAATTTCCAAAACAAAACACAATCTATCAAGACAGGACAACTTCATAGCTCATATATACCCCTTCACACTTTTCCACTTAACCTTCATTCATTGCAACATTGCAAAAAAAGACCTCTGTATTTTGCAGTCCCTCCCTCTGCACAAACTGCTGATGGGTCCGTTTCATCTCATACTTGTCTTCTCACTCTCGTTGAGTTTCTGTCTCTTCCCATATTCTGCTTCTGCGCAACTCAGTCGAAACCACTATGCCAAAACCTGTCCCAATGTCGAAAGCATCGTTAGAGAAACAGTACGAAGGAAATTTCAACAAACATTTGTTACAGTGCCTGCAACCCTTCGTCTCTTCTTCCATGATTGCTTTGTCCAGGGTTGTGATGGTTCAGTTTTGGTAGCATCCACGGGGAACAACAAAGCAGAGAAGGATCACCCTGACAATCTGTCATTGGCGGGTGATGGGTTTGACACAGTGGTGAAAGCAAAAGCAGCCTTGGATGCTGTCCCACAGTGCAGAAACAAAGTGTCATGCGCTGATATTCTCGCCTTGGCAACCCGTGATGTTGTTGCACTGGCTGGCGGACCTTCCTATGAGGTTGAATTGGGCAGATTTGATGGGCTAGTCTCCAGAGCTTCCGATGTGAACGGGAGGCTCCCTCAGCCTAACTTCAATTTGAACCAGCTCAATTCACTCTTTGTCGCGAACGGGCTCACCCAAATGGACATGATTGCCCTCTCAGGTGCGCACACCCTTGGTTTCTCGCATTGCACCAGGTTCTCCAATAGAATATTCAATTTCAGCCCTCGGAATCCAGTGGACCCTACGCTGAACAGCCTATACGCAAGCCAGCTACAATCGATGTGCCCGAGGAACGTGGATCCGAGAATAGCCATCAACATGGACCCAACCACTCCCCGGACATTCGACAATGCTTACTACAAGAATCTTCAGCAAGGAAAGGGTCTATTCACCTCCGACCAAGTCCTCTTTACGGATCAAAGGTCCAAGGCTGCCGTTAATTCTTTTGCCAGTAATCCCAATATCTTCAACGCCAACTTTGTTGCTGCCATTACCAAGTTGGGTCGCGTCGGAGTGAAGAATGCTAGGAATGGGAAAATTCGTACCGATTGCTCTGTGCTTTAA 1314 0.468 MAATSELYPQETQKQAHHILPASWAMGFPDWELETRVIGPSSSSKAEVNTSIALSTEQLISKTKHNLSRQDNFIAHIYPFTLFHLTFIHCNIAKKDLCILQSLPLHKLLMGPFHLILVFSLSLSFCLFPYSASAQLSRNHYAKTCPNVESIVRETVRRKFQQTFVTVPATLRLFFHDCFVQGCDGSVLVASTGNNKAEKDHPDNLSLAGDGFDTVVKAKAALDAVPQCRNKVSCADILALATRDVVALAGGPSYEVELGRFDGLVSRASDVNGRLPQPNFNLNQLNSLFVANGLTQMDMIALSGAHTLGFSHCTRFSNRIFNFSPRNPVDPTLNSLYASQLQSMCPRNVDPRIAINMDPTTPRTFDNAYYKNLQQGKGLFTSDQVLFTDQRSKAAVNSFASNPNIFNANFVAAITKLGRVGVKNARNGKIRTDCSVL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1688 437 PANTHER - 118 436 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1688 437 Gene3D - 139 436 - -
Glsi05g1688 437 SUPERFAMILY Heme-dependent peroxidases 135 436 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi05g1688 437 ProSitePatterns Peroxidases proximal heme-ligand signature. 298 308 IPR019793 -
Glsi05g1688 437 PRINTS Plant peroxidase signature 297 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1688 437 PRINTS Plant peroxidase signature 412 425 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1688 437 PRINTS Plant peroxidase signature 372 389 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1688 437 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1688 437 PRINTS Plant peroxidase signature 145 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1688 437 PRINTS Plant peroxidase signature 356 371 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1688 437 PRINTS Plant peroxidase signature 169 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1688 437 PRINTS Plant peroxidase signature 210 223 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1688 437 PRINTS Plant peroxidase signature 231 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g1688 437 FunFam Peroxidase 139 285 - -
Glsi05g1688 437 ProSitePatterns Peroxidases active site signature. 167 178 IPR019794 GO:0004601
Glsi05g1688 437 PRINTS Haem peroxidase superfamily signature 250 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1688 437 PRINTS Haem peroxidase superfamily signature 232 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1688 437 PRINTS Haem peroxidase superfamily signature 298 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1688 437 PRINTS Haem peroxidase superfamily signature 358 373 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1688 437 PRINTS Haem peroxidase superfamily signature 167 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1688 437 ProSiteProfiles Plant heme peroxidase family profile. 135 437 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1688 437 FunFam Peroxidase 276 417 - -
Glsi05g1688 437 Pfam Peroxidase 152 402 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g1688 437 CDD secretory_peroxidase 135 436 IPR033905 GO:0004601|GO:0042744
Glsi05g1688 437 Gene3D Peroxidase, domain 2 276 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1688 Glsi-ChrGlsi05 64909323 64914629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1688 110 437 Peroxidase AT5G67400 67.683 4.74e-166 468