Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1675 ATGTTCTTATCTCCAATTAGTAGAGCTCAGGGTTTCAGTAGTAACTCTGAGTCAGCTGGGACTCATTTTCCCGTGGAGAACGCGTACGAGCTGTTGGGGGTGTCACAGACTAGCTCATTTGCTGAGATCAAAGAGTCTTTTCGCAGATTGGCCAAAGAAACTCACCCAGACCTTGCTGAATCAAGCAACGACTCCTCTGCGTCTCGAAGATTTGTGCAAATCCTGGCCGCCTACGAGATCCTTTCAGATTCTGAGAAGAGAGCCCATTATGACAGGTACCTGTTGTCTCAGAAGAAGCTTGTACTGAAGCATTCTGGACAGTGTTCAAAATTGCACTTTTATAAATCACATGCAACTACATTCAAGGAGATGGAAGTTGTTGAATGGTTAAAGTGGTACAGATTGGCTATAAATGATATTCTGTCAGAGAAGAAGGTAGTTGTTGGAAAAGGTTATCTTGATGTAGTTGAAAGAGATTTTTATTCAGCCATACATGCGGCATACTTTGGCCCTGAAATTGAGTCTATGGAGCTTCTCCCTGAGTGCTTTGAGGCTGAGGAAAGGTCCTCTTGTGAAACACCAGAGATTTTACACTTGGTTTCAGGTCGTGATCTTTTTGGGATGGTTTGCCTAGCCAACAAGATCCCAGAGATATCATCAGCAAATAATGAAAAGTTAACTTCTTTCAGATCCTTCCACCCAAGCCTATGTCAATCTATAAAGAATGTGAACATCCACACTAATGCAGAAGTTCCATATGAATTTAGAATTCCACAATTTCATGCCCCTAACATTTCATATAATGTCTCAGATGCATATAGAGATCTAGAATTGCATGTCTCTGGAAGGGTGGTTGCTGTGGCCTCCAGGGTCCCTCCTAGAAGCTATTCTGATGGTCTGCAGAAAGAAGACGCAGAAGATTGCATTCATGTTTTTCTTAATTCAGATGAAGACCCCAAGCATATCGGCAGCAGCTTCTCTAAAAGTTACTATGCAGGTGGTTCAGTTGGAACAAGAATTCATTTGGGTACCATAGCTGGACTTGGGACCAGTCCAGACGAAGGTTCCTGTTATGTCTATGACAGCAGAGGTGCAAAGACCCATGCGATTATGAAACACAGAACCTTACTGGTGAAGCATATGCACTGGTATCAAGTTGGAGAGAAAGTTTCTACTTGTGAGTGTAGATGTACCAGAGCCCAATTACCACCAAGCAAATTTTGGCTGTTTGAGCCTCGTTGTGGCTTGCATGACATAGGGGGATGGTATGTTGAAACATATGGGAAAGATAGGAAGGGTCGAACAATCCCATCACAAAGGTTATGGCATGGCTTGGATGATGGTGAGCATTTTGAGAGAAGACTTCATCCAGCGATGTATTTACTTGCTCTTGCATATAGGACCCTTGATCTTGAATATGCCAAACTAAGAAAACAAACATTTAGGAATGCTGTGGAAGGACAACTGTTTAGAATCCTTCATTGGTGCAAAAAAATGGTTTAA 1503 0.4238 MFLSPISRAQGFSSNSESAGTHFPVENAYELLGVSQTSSFAEIKESFRRLAKETHPDLAESSNDSSASRRFVQILAAYEILSDSEKRAHYDRYLLSQKKLVLKHSGQCSKLHFYKSHATTFKEMEVVEWLKWYRLAINDILSEKKVVVGKGYLDVVERDFYSAIHAAYFGPEIESMELLPECFEAEERSSCETPEILHLVSGRDLFGMVCLANKIPEISSANNEKLTSFRSFHPSLCQSIKNVNIHTNAEVPYEFRIPQFHAPNISYNVSDAYRDLELHVSGRVVAVASRVPPRSYSDGLQKEDAEDCIHVFLNSDEDPKHIGSSFSKSYYAGGSVGTRIHLGTIAGLGTSPDEGSCYVYDSRGAKTHAIMKHRTLLVKHMHWYQVGEKVSTCECRCTRAQLPPSKFWLFEPRCGLHDIGGWYVETYGKDRKGRTIPSQRLWHGLDDGEHFERRLHPAMYLLALAYRTLDLEYAKLRKQTFRNAVEGQLFRILHWCKKMV 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1675 500 ProSiteProfiles dnaJ domain profile. 27 94 IPR001623 -
Glsi05g1675 500 SUPERFAMILY Chaperone J-domain 25 97 IPR036869 -
Glsi05g1675 500 Gene3D DnaJ domain 16 114 IPR036869 -
Glsi05g1675 500 SMART dnaj_3 26 86 IPR001623 -
Glsi05g1675 500 ProSitePatterns Nt-dnaJ domain signature. 71 90 IPR018253 -
Glsi05g1675 500 CDD DnaJ 27 83 IPR001623 -
Glsi05g1675 500 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 499 - -
Glsi05g1675 500 Pfam DnaJ domain 27 91 IPR001623 -
Glsi05g1675 500 PRINTS DnaJ domain signature 29 47 IPR001623 -
Glsi05g1675 500 PRINTS DnaJ domain signature 47 62 IPR001623 -
Glsi05g1675 500 PRINTS DnaJ domain signature 66 86 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1675 Glsi-ChrGlsi05 64844810 64854242 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1675 29 91 C2H2 Transcription Factor Family AT1G74250 45.455 6.02e-09 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1675 05 64844810 64854242 Glsi05g1675 05 64844810 64854242 ECH