Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1671 ATGTTGGAGTTGTGCCGAAGGCCATTGGAGATGTGCTTTGGCGGAGCAGGCAACGATGAGCTTCTCTGGCATATGGACTTGAAGCCTCACGCATTAGGGGACTATTCAATTGCAGTAGTACAAGCTAATTCGTCTTTGGAAGACCAAGGTCAAGTGTTCACCTCTCCCTCTGCTACCTATATCGGGGTATATGACGGCCATGGCGGACCCGAAGCTTCCCGTTTCATCACCAATAACCTCTTCTCCTTTCTCCAAAAGTTTGCTTCAGAGGAAGGTGGGTTATCGGAGGGTGTGATAAAGAAAGCCTTTGATGCAACAGAAGAGGAATTCTTACATTTAGTGAAGCAATCATGGACTACTCGGCCACAGATTGCTTCAGTGGGTTCGTGTTGTCTTGTTGGGGTGATTACAAACAATGTTCTTTATGTGGCTAACCTCGGGGATTCAAGGGCAGTTCTGGGTCGAAAAGCATTGGGAGGGCAGGTAAATTATTCTGTGGTGGCAGAGCGGTTGTCCACTGATCATAATGTTGGAGTGGAGGAGGTCAGAAAGGAAGTTGTGGCACTCCATCCCGATGATGCACACATTGTGCTTTACACTCATGGAGTTTGGCGAATCAAGGGCATAATTCAGGTCTCAAGATCAATTGGAGATGTTTATCTAAAAAAACCTGAGTTTAATAAAGATCCTCTGTTCCAACAATTTGGATTCCCTGTCCCTTTAAAGAGACCTGTAATGACTGCTGAACCGTCAGTATTGATTCGGAAGTTGAAGCCGGATGACATGTTTTTGATATTTGCATCAGATGGACTATGGGAGCATTTAACTGATGAAGCGGCCGTTGACATCATCTTCAGAAATCCAAGAATAGGAATAGCAAAACGATTGGTAAGAGCTGCATTAGAGGAGGCTGCAAAGAAAAGAGAAATGAGGTATGAGGATATAAAGAGAATTGAGAAAGGTGTAAGGCGCCATTTCCATGATGATATTACCGTGATCGTAATATACCTAGATCATTCACAAGATTCTCTAAGCGCTCCGCCAAAACACCGTGGCATCTATGACTGCACTAGTGCTCCTGTTGATATCTTCTCTCTGAATGCAGACGAAGATGACCTCTAA 1122 0.4456 MLELCRRPLEMCFGGAGNDELLWHMDLKPHALGDYSIAVVQANSSLEDQGQVFTSPSATYIGVYDGHGGPEASRFITNNLFSFLQKFASEEGGLSEGVIKKAFDATEEEFLHLVKQSWTTRPQIASVGSCCLVGVITNNVLYVANLGDSRAVLGRKALGGQVNYSVVAERLSTDHNVGVEEVRKEVVALHPDDAHIVLYTHGVWRIKGIIQVSRSIGDVYLKKPEFNKDPLFQQFGFPVPLKRPVMTAEPSVLIRKLKPDDMFLIFASDGLWEHLTDEAAVDIIFRNPRIGIAKRLVRAALEEAAKKREMRYEDIKRIEKGVRRHFHDDITVIVIYLDHSQDSLSAPPKHRGIYDCTSAPVDIFSLNADEDDL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1671 373 FunFam Probable protein phosphatase 2C 42 25 345 - -
Glsi05g1671 373 Pfam Protein phosphatase 2C 56 306 IPR001932 -
Glsi05g1671 373 CDD PP2Cc 41 337 IPR001932 -
Glsi05g1671 373 ProSitePatterns PPM-type phosphatase domain signature. 60 68 IPR000222 GO:0043169
Glsi05g1671 373 Gene3D - 24 344 IPR036457 -
Glsi05g1671 373 ProSiteProfiles PPM-type phosphatase domain profile. 34 337 IPR001932 -
Glsi05g1671 373 PANTHER PROTEIN PHOSPHATASE 35 336 IPR015655 GO:0004722|GO:0006470
Glsi05g1671 373 SMART PP2C_4 24 335 IPR001932 -
Glsi05g1671 373 SUPERFAMILY PP2C-like 38 339 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1671 Glsi-ChrGlsi05 64824233 64827438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1671 18 348 PP2C-type Phosphatase Gene Family AT3G51370 57.310 9.68e-146 416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1671 05 64824233 64827438 Glsi05g1671 05 64824233 64827438 ECH