Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1662 ATGCCTATGCCTCAAACATATCTCAGCAAATCATTCTTGTCATTTGAAAGAGGGGGTACTATGACTTTCTGGAGGGACGAAGAAGCCAATGATCAGAAATCCATCAACGAGCAAGATGTAGATGGTGGATCAAAGACAATGGGAAATTTTGGAAGTGTCACAGAGGAGGATAACTTAGGAGAATGGTTGAGTTTAGGACTCAACGGAGACATGATTCTGGAAGTTGATGAAAACCCAGATCTGCAATCAAAACCTCTCAACAATAAGTTATTCTCATGCAATTTCTGCATGAGAAAGTTCTACAGTTCACAAGCCTTGGGTGGTCACCAGAATGCACACAAGAGGGAAAGAGTGGCAGCCAGAAGGTACCAATCTCATAAGACGATGATGATGATGAATACAATTGGTGTGCAGCCCCACTCGCTTGTTCACAAGCCAAGCAGAGAAAGGTCCGCTACGGTTGCTCCATTAGGTGAAGCCAATTCTCGGTTTGGAATGGCATGGACACCCCTTATTCTAGAACAAGCAATGGATTTGATTTGGCCAGGAAGCTTTCGGGTGGATTTGCCAAAGCAAGCCTCTGATGTAAATAAGCTTGACCTAGATCTTCGGCTATGA 618 0.4401 MPMPQTYLSKSFLSFERGGTMTFWRDEEANDQKSINEQDVDGGSKTMGNFGSVTEEDNLGEWLSLGLNGDMILEVDENPDLQSKPLNNKLFSCNFCMRKFYSSQALGGHQNAHKRERVAARRYQSHKTMMMMNTIGVQPHSLVHKPSRERSATVAPLGEANSRFGMAWTPLILEQAMDLIWPGSFRVDLPKQASDVNKLDLDLRL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1662 205 Gene3D Classic Zinc Finger 75 145 - -
Glsi05g1662 205 ProSitePatterns Zinc finger C2H2 type domain signature. 93 113 IPR013087 -
Glsi05g1662 205 PANTHER ZINC FINGER PROTEIN 4-LIKE 28 205 - -
Glsi05g1662 205 MobiDBLite consensus disorder prediction 36 51 - -
Glsi05g1662 205 SUPERFAMILY beta-beta-alpha zinc fingers 87 118 IPR036236 -
Glsi05g1662 205 MobiDBLite consensus disorder prediction 26 51 - -
Glsi05g1662 205 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 118 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1662 Glsi-ChrGlsi05 64749923 64750540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1662 51 186 C2H2 Transcription Factor Family AT1G24625 35.762 9.77e-19 79.0