Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1655 ATGTGTGTGTGTGTGGTTTCACATTTAGAACATGATATTTACTTTAAACCGAATTCCGAAGACGACCAGAATCCCAGCATGGAAGATCCCTTGGTCTATTATTATGCTCTTTGCTTCTTTCTCTTCCTAATATCTTTGAAGCTCTTCTTCCAAACAAGAACAAGATTCAAAAATCTCCCTCCGAGCCCACCTTCTATTCCAATACTGGGCAACCTCCATCAACTAAAACAACCACTTCACCGCACCCTGCACAGCTTCTCACAAAAATACGGTCCCGTTTTCTCTCTCAAATTCGGGTCCCGCCCTGTCGTCGTCGTTTCATCTCCATCTGCTGTTGAAGAGTGTTTCAACAAAAACGACATCATTTTCGCGAACCGTCCTCGCTCTCTCAAGATTAAGTACCTTGGTTACGATCACACCATTCTGATTTCATCACCCTATGGCGACCATTGGCGCAACCTACGTCGTATCAGCTCCCTTGAGATCCTCTCTGCACACCGTCTTAACTCATTCTTGGGTATTCGAAAAGATGAGACCGAGTTGTTACTCCGCAAGCTGTGTCGAGACTCTGGCGAAGACTTCGCGAAGGTGGAGCTGAGGTCCCTGTTTTCGGATCTAACCTTTAACACCATAATGAGAATGGTCGCCGGTAAACGCTATTACGGAGAGGAATCTGACGTGACGGACGCGGAGGAGGCCAAAAATTTTAGAGATGTCATAAAAGAGATAGCAGGTTTCGGGTTGGGATCGAAGGAGTCGAACCTTGGGGATTCTGTGCCTTTATTCAGGTGGATTGATTATAATGGTTACCAGAAGAAGTTACGAAGGGTTGGGAAGAGAATGGATGAGTTATTCCAAGGACTCATCGATGAGCATCGGAACAAGAAGGAAAGGTTGGAAAGCACAAATACCATGATAGATCATCTACTTTCCTCGCAAGAATCGCAGCCCGAGTATTACACGGACGAGATCATCAAAGGGCTTATTATGGTGTTGATAGTTGCTGGAACAGACACTTCAGCTATAACATTAGAGTGGGCAATGTCTAACCTGTTAAACCATCCAGAGGTTTTGGAAAAAGCGAGACTTGAATTGGACGCTCATGTTGGACACGAGCGGCTTATTGAGGAAGCGGATGTGACCAAATTACCATACCTTCACAACGTTATCTCGGAGACTCTGCGGTTGTGCCCGGCAGCCCCATTGCTAGTGCCCCATTTCTCTTCTGATGATTGCACCGTAGGGGGTTATGACGTGCCACGTAACACAATGTTATTGGTGAACGCCTGGGCCATCCATAGGGACCCTGAATTGTGGACTGACCCAACAACCTTTAAGCCCGAGAGGTTTGAAAATGGCGAAGGAGACGCGCGTAAGCTGTTACCGTTTGGGCTCGGGAGGAGGGCCTGTCCAGGAGCTGGCCTCGCCCAACGAACAGTAGGCCTGACTTTAGGTTCCATGATTCAGTGCTTTGAATGGAAAAGGGTTGGCAAAGATCAAATTGACATGAACGAAAGAAGTGGAACCTTGATGCCCAAGGCCATTCCATTGGAGGCCCAATGCAAAGCGCGTCCAATCATCAAGAAGGTTCTGTCCCAATCGTAG 1605 0.4723 MCVCVVSHLEHDIYFKPNSEDDQNPSMEDPLVYYYALCFFLFLISLKLFFQTRTRFKNLPPSPPSIPILGNLHQLKQPLHRTLHSFSQKYGPVFSLKFGSRPVVVVSSPSAVEECFNKNDIIFANRPRSLKIKYLGYDHTILISSPYGDHWRNLRRISSLEILSAHRLNSFLGIRKDETELLLRKLCRDSGEDFAKVELRSLFSDLTFNTIMRMVAGKRYYGEESDVTDAEEAKNFRDVIKEIAGFGLGSKESNLGDSVPLFRWIDYNGYQKKLRRVGKRMDELFQGLIDEHRNKKERLESTNTMIDHLLSSQESQPEYYTDEIIKGLIMVLIVAGTDTSAITLEWAMSNLLNHPEVLEKARLELDAHVGHERLIEEADVTKLPYLHNVISETLRLCPAAPLLVPHFSSDDCTVGGYDVPRNTMLLVNAWAIHRDPELWTDPTTFKPERFENGEGDARKLLPFGLGRRACPGAGLAQRTVGLTLGSMIQCFEWKRVGKDQIDMNERSGTLMPKAIPLEAQCKARPIIKKVLSQS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1655 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Glsi05g1655 534 PANTHER CYTOCHROME P450 82C3-RELATED 39 524 - -
Glsi05g1655 534 FunFam Cytochrome P450 family protein 50 527 - -
Glsi05g1655 534 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1655 534 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1655 534 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1655 534 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1655 534 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1655 534 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1655 534 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1655 534 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1655 534 PRINTS E-class P450 group I signature 111 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1655 534 SUPERFAMILY Cytochrome P450 60 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1655 534 CDD CYP81 91 517 - -
Glsi05g1655 534 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1655 534 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1655 534 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1655 534 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1655 534 Gene3D Cytochrome P450 45 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g1655 534 Pfam Cytochrome P450 60 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1655 Glsi-ChrGlsi05 64709863 64712323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1655 36 534 Cytochrome P450 AT4G37340 56.522 0.0 580