Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1653 ATGAATGTTTTGCCTTTTGGTATGGTGAGAGATTCAGCGATCATACTGAAAATTAGACTAAGACTAGTATTTTTTTCCATGGGAACTCTTCACTACCATAGAACTCCTATCCCGCTGTTTCTTCTTCTTTCTCTCCTTCAGTTCTCATGGCTTCAGTCCCTCTCGTCGTCCTACACCATCCCATATAAGTATTTCATCAGTTGTGGGTCAAATAACAATGTCACAGACACAGAAAGTAGGTGGGTTTTCGTCGGGGATTCTTCCCTTTCCTTATCCTTTCCAAAGCAGAGCAGCGCTGAGAAAGCTAGTAGTCTGCCATCGGCGATTTCTCCCCTCTATCAAACGGCAAGAGTCTTTCACCAGAAATTTAATTATGAGTTCAGCATCGACAATTATGGCTCTTACCTGGTACGCCTTCATTTCTTTGCTTTCTCCTCCCCAAGTAATCTGCCCAGTGCTAGGTTCAATGTTTCGGTTCCTGGGTTCTGGTTGTTGCAGAATTTCAGCGGCAAAAATTCTAGCAACTCTCCTTTAGTGAAAGAATTTTTCATAAACATTAATAGCAGCAACTTCAAAGTCACTTTCAGACCTCTCGAATCATCCTTTGCATTTGTAAATGCCATAGAACTCTTCCCGCTTCCCGCTAATTTCACCCCAGATGATGCTCCGAATGTTAGTCACAGTGGGGATCTTGGGAATTACAAGGGTTTGCTGTCTCGGGTGTTACAGATCACTTATAGGCTTAACGTTGGAGGCAATAATGTCACAAGAGACCAAGATTACTTTGGGAGATTCTGGGAGATTGATGATCCTTATGGTTTCTTTAACTCACGGACTGCAAAGAATATCAGTTCCAACTTCAAGGTTAACTACCGGGACGAAGATGATGACTCTAATATTCATTTAGCTACTAAGTATATTGCCCCAGATCCTGTGTACCAAACTGCAAAAGAGGTTAATATAGAACCCACCACCAGACCCTCTGATTTCTTCAACATAACCTGGCGTCTCCCTGTGGAAAAGAATGCTCCTTATCTTGTCCGGGTTCACTTCTGCGACTTTGAAAGTGTTTCGCTTAATCTTACATTCTTCTATCTCTTCATCTACAACAACTTCCGGTCAATGATCAATTCCTACAACGAATCTAACCAGTTGCCTGCTCCAATTTATTATGATTTTGTGGTAAATTCTGATGACTCTGGACTCATGAATATCAGCGTAGCACCTCTTCCATCTCAAATTCCAAATGCGTTTTTAAACGGGCTAGAAATCATGAAAATTATTGATTCATCAGATTCTGTTCCCGTGGAGGAATCTAGTGGCAAGCAGAATCATCTCCCTCTGGTTCTGGGGTCAGCTCTTGGAGGTTTTGTCCTAATTTCCATTGTGGTAGTTGGGTTCTTAATTTGGCGGCTGAGGTTTAGGAAGCGGGAAACGAAGCCCGTTGAGAATTCGGATTGGCTGCCACTGCCAATTTATGGAGGAGGGAGTTCTCACAGTAGATTGACTGAGGGAACCCACCAAGGCTCCCCTCTTCCCAACTTAAATCTTGGACTGAAAATCTCTTTGCTTGAGATCCAATTCGCAACCAAGAACTTTGATACAAAACGGTTAATTGGGAAGGGTGGCTTTGGCAACGTTTATAAGGGAATTCTCAAGAATGGTTTGAGAGTGGCTGTGAAGAGAAGTGAACCCGGGTCAGGACAAGGGCTTCCAGAATTTCAGACAGAGATCATGGTTTTGTCCAAAATTCGCCATAAGCATCTTGTTTCCTTAATTGGGTATTGTGATGAACGGTATGAAATGATATTGGTTTACGAATACATGGAAAAAGGAACACTGAGAGATCATTTGTACCATTCAAATTTGCCAAGCTTGTCATGGAAGCAGAGGCTTGAAATTTGCATTGGAGCTGCAAGAGGTCTTCATTACCTTCACAAAGGAGCAGCAGGAGGAATCATCCACCGTGATGTGAAGTCCACAAATATATTGCTCGATGAAAACCATGTTGCTAAAGTTGCCGACTTTGGCCTCTCAAGAACAGGTCCTCTTGATCACCAACCCTATGTCAGCACAGGTGTTAAAGGCACTTTTGGATATCTTGATCCTGAGTATTTCAGGTCGCAACAGTTAACAGAGAAATCTGATGTTTACTCATTTGGGGTGGTTCTTCTTGAAGCGCTGTGTGCAAGACCAGCCATTGAACCGATGCTTCCGAGGGAGCAGGTGAACTTGGCAGAATGGGGAATCCTTTGCAAGAATAAGGGGATACTCGAAGAGATTATAGATCCTTCAATCAATGGGCAAATAGATCCAAACTCGCTCAGAAAATTTAGTGAGACAGTAGAGAAATGTTTACAGGAAGATGGTTCTGATAGGCCAAGCATGGGTGATGTATTGTGGGACTTGGAGTATGCACTGCAACTTCAACGAGGAGCAAGACAGAGAGAGCCGCACGAGGACAGCTCTAGCGGTGCTTCTGCATCACTTCAATTGCCCAATGTTCGTCTTCTTCCTTCACTTTCCACACTAAGTGAGTCGGGTGACATGTCGATAAGGGTTGATGAGTCTGATAGTGCAGTCGATTATGTTTTCTCTCAGTTGAAAATGGATGATGCTAGATAG 2625 0.4316 MNVLPFGMVRDSAIILKIRLRLVFFSMGTLHYHRTPIPLFLLLSLLQFSWLQSLSSSYTIPYKYFISCGSNNNVTDTESRWVFVGDSSLSLSFPKQSSAEKASSLPSAISPLYQTARVFHQKFNYEFSIDNYGSYLVRLHFFAFSSPSNLPSARFNVSVPGFWLLQNFSGKNSSNSPLVKEFFININSSNFKVTFRPLESSFAFVNAIELFPLPANFTPDDAPNVSHSGDLGNYKGLLSRVLQITYRLNVGGNNVTRDQDYFGRFWEIDDPYGFFNSRTAKNISSNFKVNYRDEDDDSNIHLATKYIAPDPVYQTAKEVNIEPTTRPSDFFNITWRLPVEKNAPYLVRVHFCDFESVSLNLTFFYLFIYNNFRSMINSYNESNQLPAPIYYDFVVNSDDSGLMNISVAPLPSQIPNAFLNGLEIMKIIDSSDSVPVEESSGKQNHLPLVLGSALGGFVLISIVVVGFLIWRLRFRKRETKPVENSDWLPLPIYGGGSSHSRLTEGTHQGSPLPNLNLGLKISLLEIQFATKNFDTKRLIGKGGFGNVYKGILKNGLRVAVKRSEPGSGQGLPEFQTEIMVLSKIRHKHLVSLIGYCDERYEMILVYEYMEKGTLRDHLYHSNLPSLSWKQRLEICIGAARGLHYLHKGAAGGIIHRDVKSTNILLDENHVAKVADFGLSRTGPLDHQPYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEALCARPAIEPMLPREQVNLAEWGILCKNKGILEEIIDPSINGQIDPNSLRKFSETVEKCLQEDGSDRPSMGDVLWDLEYALQLQRGARQREPHEDSSSGASASLQLPNVRLLPSLSTLSESGDMSIRVDESDSAVDYVFSQLKMDDAR 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1653 874 Pfam Protein tyrosine and serine/threonine kinase 535 800 IPR001245 GO:0004672|GO:0006468
Glsi05g1653 874 ProSiteProfiles Protein kinase domain profile. 533 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1653 874 FunFam receptor-like protein kinase FERONIA 498 608 - -
Glsi05g1653 874 PANTHER OS07G0166700 PROTEIN 520 810 IPR045272 GO:0004714|GO:0006468
Glsi05g1653 874 SUPERFAMILY Protein kinase-like (PK-like) 514 804 IPR011009 -
Glsi05g1653 874 FunFam Putative receptor-like protein kinase 63 214 - -
Glsi05g1653 874 Gene3D Transferase(Phosphotransferase) domain 1 609 827 - -
Glsi05g1653 874 CDD STKc_IRAK 539 804 - -
Glsi05g1653 874 FunFam Receptor-like protein kinase FERONIA 609 825 - -
Glsi05g1653 874 FunFam Putative receptor-like protein kinase 240 428 - -
Glsi05g1653 874 Gene3D Phosphorylase Kinase; domain 1 501 608 - -
Glsi05g1653 874 SMART serkin_6 533 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1653 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Glsi05g1653 874 Gene3D - 62 212 - -
Glsi05g1653 874 Gene3D - 242 428 - -
Glsi05g1653 874 Pfam Malectin-like domain 66 427 IPR024788 -
Glsi05g1653 874 ProSitePatterns Protein kinases ATP-binding region signature. 539 561 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1653 Glsi-ChrGlsi05 64703648 64708061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1653 37 874 Receptor kinase-like Gene Family AT2G23200 46.487 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi05g1653 Malectin_like 1.4e-34 CL0202