Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1644 ATGAGCTACCTGGGAGTCGGTCTCCATTTATGGTGGAGAATTCTTGCACTTTTTATTCTTGTTAGTCAATCCTCTGGCCTTAGCAGAGAGGGTGTTCTGTTGCTTTCCTTCAAATACTCTATTCTGAGCGACCCTCTCCGCGTTCTTGGAAGCTGGAATTATAGCAACGAAACACCTTGTTCATGGAACGGAGTTACATGTGCAGCCATACCAAGGGCAGCAAATACTCAAGCTCGAGTGATTGGCTTAGCTCTCCCGAACTCTCAGCTTCTTGGTTCTATTCCTGCTGATCTGGGTTTGATTGAGCACCTCCAAATTCTCGACCTTTCCAACAATTCGCTCAATGGGTCTCTGCCATCTTCACTTTTTCAGGCTTTTGAGCTTCGGATTCTTAAGTTGTCTAACAATTTGATATCAGGGGAAATTCCAGACTCCATAGTACAGCTTAGAAATCTTCAGTTTCTTAACCTTTCTGACAATGCCTTGGCAGGAAAAGTATCCACCAATTTGGCAAATATGCTAAATCTAACAGTGGCTTCTTTGAAGAATAATTCCTTGTCTGGTGGCCTTCCTGGTGGGTTTCAAACGTTACAAGTTTTAGATCTATCGTCGAATTTGTTCAATGGATCTTTGCCCCCGGATTTTAGTGGTGCTAGTTTGCGTTACTTGAACATTTCCAACAACAGGTTATCCGGGAAAATCCCAACTGAGTTTGCAGCGAAAATTCCAGGTAATGCAACCATTGACCTCTCCTTCAACAATCTCACCGGCGAAATTCCTGATGCCATCGTGTTTATGAATCAACAATCCAAGTCTTTTTCCGGAAATTCTGATCTGTGCGGAGAACCAACCAAGAATGCCTGTTCTATTCCTTCCTCCCCGTCGTCTCCGCCAAATGTCTCCGCTCCTACATCTCCTCCTGCTTTGGCTGCAATTCCAAAGACATTTTACTCTCCTGATTCCGAAGGTTCACCAGGATCAGCAGCCGGGTCTTCACAGCAAAAGCAAAACGGGATTCGACGAGGAACAATTATAGAAATCGTAGTGGGAGATATTGTTGGCATTGGAATTTTAGCTTTGATTTTTGTGTACGTCTACCGGTTGAAGAGAAAGAAGAACATGGAGAAAGCTTTGAACATGGAAGCTACCGCAGCAAAGAGTGATTGGTCGTCACCATCGTCTGAGCCAAGAGTGTTCACAAGGTGGTCGTGCCTGCGCAAAAGAGCCGAAGAAGAAGAGTCGGCTGACACCACAAGCTCTTCTGATAACGAAGTGGAAGCACAAAATGGGCAAAAGGGTAATGAAAAACGGGGACAGAGCAAAACAGGTACCCTGGTAATTGTTGATGGTGATAAAGAGCTTGAGCTGGAAACACTCCTAAAGGCTTCAGCATATATACTGGGGGCAACTGGTTCCAGCATAATGTACAAAGCGGTGCTCGATGATGGCACAGCGTTGGCGGTTCGCAGAATCGGTGAGAGCGGGGTGGAACGGTTCAAGGACTTAGAGAACCAAGTTCGGGTCATGGCCAAATTGGTGCACCCCAATCTGGTTCGAGTTCGGGGGTTCTACTGGGGACACGACGAGAAGCTCATCATCTATGACTTCGTTCCAAATGGCTGCCTTGCCAATATTCGTTACAGGAAGGTGGGCTCCTCGCCTTTTCATTTACCATGGGAGGTTAGACTCAAGATTGCGAAGGGGGTGGCACGTGGGTTGGCTTACCTTCACGATAAGAAACACGTGCATGGAAATTTGAAGCCAAGCAATATTCTGTTGGGGAACGACATGGAGCCCAAGATTGGAGACTTCGGGGTTGAGAGAATAGTTAGTCATAAAGGTGGAGCATCGGCTCGTATCTTCGGGAGCAAGAGGTCGACGGCCTCGCGGGACAGCTTCCAAGAAATTACATATGGGCCCAGCCCAAGTCCGAGTCCAAGCTCGATAGGGGGTGTATCAGCGTACCATGCACCCGAGTCACTGAGAAACTTAAAGCCTCACCCAAAGTGGGATGTATACTCGTTTGGGGTCATATTTCTTGAGCTTCTAACGGGGAAGGTGGTGGTTATGGACGATGATGGAGGAGGGGTATTGGTTGAGGACAAGAACAGGGCCCTTAGGATGGCTGACGTGGCCATCCGAGCTGACATGGAGGGAAAAGAGGAGGCCTTATTGGGTTGGTTCAAGTTAGGGTATAGTTGCGTGTCTAGTGTCCCCCAGAAGAGGCCATCCATGAAAGAAGTGTTACAAGTTCTTGAAAAGATCCGATCCTCATCTTCATCCTCCTATTATTACGGTCCTTAA 2304 0.4714 MSYLGVGLHLWWRILALFILVSQSSGLSREGVLLLSFKYSILSDPLRVLGSWNYSNETPCSWNGVTCAAIPRAANTQARVIGLALPNSQLLGSIPADLGLIEHLQILDLSNNSLNGSLPSSLFQAFELRILKLSNNLISGEIPDSIVQLRNLQFLNLSDNALAGKVSTNLANMLNLTVASLKNNSLSGGLPGGFQTLQVLDLSSNLFNGSLPPDFSGASLRYLNISNNRLSGKIPTEFAAKIPGNATIDLSFNNLTGEIPDAIVFMNQQSKSFSGNSDLCGEPTKNACSIPSSPSSPPNVSAPTSPPALAAIPKTFYSPDSEGSPGSAAGSSQQKQNGIRRGTIIEIVVGDIVGIGILALIFVYVYRLKRKKNMEKALNMEATAAKSDWSSPSSEPRVFTRWSCLRKRAEEEESADTTSSSDNEVEAQNGQKGNEKRGQSKTGTLVIVDGDKELELETLLKASAYILGATGSSIMYKAVLDDGTALAVRRIGESGVERFKDLENQVRVMAKLVHPNLVRVRGFYWGHDEKLIIYDFVPNGCLANIRYRKVGSSPFHLPWEVRLKIAKGVARGLAYLHDKKHVHGNLKPSNILLGNDMEPKIGDFGVERIVSHKGGASARIFGSKRSTASRDSFQEITYGPSPSPSPSSIGGVSAYHAPESLRNLKPHPKWDVYSFGVIFLELLTGKVVVMDDDGGGVLVEDKNRALRMADVAIRADMEGKEEALLGWFKLGYSCVSSVPQKRPSMKEVLQVLEKIRSSSSSSYYYGP 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1644 767 Pfam Leucine Rich Repeat 219 238 IPR001611 GO:0005515
Glsi05g1644 767 SUPERFAMILY Protein kinase-like (PK-like) 466 753 IPR011009 -
Glsi05g1644 767 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 149 760 IPR046959 -
Glsi05g1644 767 Gene3D Ribonuclease Inhibitor 28 194 IPR032675 -
Glsi05g1644 767 CDD STKc_IRAK 467 755 - -
Glsi05g1644 767 MobiDBLite consensus disorder prediction 410 440 - -
Glsi05g1644 767 ProSiteProfiles Protein kinase domain profile. 461 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1644 767 PRINTS Leucine-rich repeat signature 104 117 - -
Glsi05g1644 767 PRINTS Leucine-rich repeat signature 149 162 - -
Glsi05g1644 767 FunFam Leucine-rich repeat receptor-like protein kinase 28 192 - -
Glsi05g1644 767 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Glsi05g1644 767 MobiDBLite consensus disorder prediction 320 337 - -
Glsi05g1644 767 FunFam Leucine-rich repeat receptor-like protein kinase 196 290 - -
Glsi05g1644 767 Gene3D Transferase(Phosphotransferase) domain 1 538 764 - -
Glsi05g1644 767 Pfam Leucine rich repeat 103 162 IPR001611 GO:0005515
Glsi05g1644 767 MobiDBLite consensus disorder prediction 284 337 - -
Glsi05g1644 767 Gene3D Ribonuclease Inhibitor 195 290 IPR032675 -
Glsi05g1644 767 Gene3D Phosphorylase Kinase; domain 1 427 536 - -
Glsi05g1644 767 Pfam Protein kinase domain 467 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1644 767 SUPERFAMILY L domain-like 33 283 - -
Glsi05g1644 767 MobiDBLite consensus disorder prediction 420 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1644 Glsi-ChrGlsi05 64650482 64653103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1644 14 766 Receptor kinase-like Gene Family AT4G37250 57.949 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi05g1644 Pkinase 1.4e-31 CL0016