Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1627 ATGGAAACATCGGAGAATTGTTGCGTCAAGGTTGCTGTGCACATTCGCCCTCTCATTGCTGATGAACGCCAACAAGGTTGTAGAGAATGTGTCAGCGTTACACCTGGAAAGCCACAGGTTCAAATAGGGTCACATTCCTTTACATTTGATCATGTTTATGGGAATGGAGGATCTTCTTCGTCAGCAATGTTTGAAGAATGCGTTATTCCATTGGTTGATGGTTTATTTCAAGGATACAATGCTACTGTTCTTGCTTATGGCCAGACGGGATCTGGGAAGACTTATACCATGGGAACTGGCTATAATGATAATTGCCAGAATGGAGTAATTCCTCAGGTTATGAATGCCTTGTTCAACAAGATTGAGACATTAAAGCATCAAACAGAATTTCAGTTGCAAGTCTCCTATATTGAGATTCTAAAGGAAGAGGTGAGGGATTTGTTGGATACGTTATCCATGGGCAAATCAGAAACCTCTAATGGCCATTCTGGAAAATTAACTGTTCCTGGGAGGCCATCAATACAAATTCGTGAAACATCAAACGGAGTGATTACACTGGCCGGTTCCACTGAAGTTTCTGTAAGTACGTTACAGGAGATGGCTGCTTGCTTGGAGCAAGGTTCAGTAAACAGGGCAACGGGAAGTACAAATATGAACAACCAGTCCAGTCGGTCACATGCTATCTTCACGATTACAATAGAACAGATGCGCAAACTCCATTCAGTATCTCCTGGCAGTGACACTTCAGATGAGGATATGGGTGAAGAATATCTTTGTGCAAAGCTCCATTTGGTGGATCTAGCTGGATCTGAACGAGCTAAAAGAACAGGTTCTGACGGGCTTCGATTAAAAGAAGGTATACACATTAATAAAGGTCTTCTTGCACTTGGTAATGTCATTAGCGCACTTGGGGATGAGAAAAAGCGAAAAGATGGTGTGCACATCCCTTACCGGGACAGCAAACTCACTCGACTCTTGCAGGATTCACTTGGTGGAAACAGCAAAACTGTCATGATAGCTTGTATTAGTCCTGCTGACATCAATGCTGAGGAAAGTCTTAATACTCTCAAGTATGCAAATCGTGCACGCAATATTCAGAACAAGCCTGTTGCTAATAGAGATTTAATATCCAATGAGATGCAGCAAATGCGCCAGCAGCTAAAGTACTTGCAGGCTGAACTTTCTGCTCGTGGAGGACCTCCAGCTGATGATGTGCAGGTTCTTAAAGAAAGGATTGCTTGGCTTGAGGCAACTAATGAGGACCTCTGTCGAGAACTTCATGAATATCGTAGTAGATGTGCAATGGATACACAAGATGGGGATATTTGCCCTGTGACTGATGGACTTGAGAGGGGCTTTCAGAGCCTAGATTCATCTGACCATCAGACAGCTGAAAGCTTATCAGGGGAAAATTCCAGGGAAACTGATGAAGCAACAAAAGAATTGGAGCATGCACTCTTGCAAAATACCATGGATGAAGAGATGAGGGAGTTAAATAAGCGCTTGGAGCAGAAAGAGTCTGAGATGAAACTCATTGGAGGAGTTGAAACGGAAGCACTCAAACAGCACTTTGGGAAAAAAATTATGGAACTTGAGGAAGAGAAAAGAAAAGTGCAGCAAGAAAGGGACCGTTTGTTAACTGAGGTAGAGAATCTTGCTGCTAATTCGGATGGACAAGCACATAAAACTCAGGATATTTGTGCCCAAAAATTGAAGACATTGGAAGCACAGATTTTAGACTTCAAGAAGAAACAAGAAAACCAGGTTCAGCTTCTAAAGCAAAAGGAGAAGAGTGAAGAAGCTGCAAAAAGGCTGCAAGCTGAAATACAATATATCAAGGCTCAGAAGGTTCAGTTGCAGCATAAAATGAAGCAAGAGGCAGAACAATTTCGACAATGGAAGGCCTCCCGTGAGAAGGAGTTACTCCAGTTGAAAAAAGAAGGGAGAAGGAATGAGTATGAGAGACATAAACTTGAGGCTCTTAACCAGCGCCAAAAAATGGTTCTTCAGAGGAAGACAGAGGAAGCAGCAATGGCTACAAAAAGGCTAAAAGAATTGTTGGAAGCCCGCAAATCTTCTCCACGTGAAAATTCAGTTAACTCAAATGGACATCTACAGCCTGGGCAGATCAATGAGAAATCTCTCCAGAGGTGGCTTGATCATGAGCTTGAGGTCATGGTCAATGTGCATGAAGTTCGTGCTGAATTTGATAAGCAAAACCGTGTACAAGCTGCACTGGAAGAAGAGCTGGCTTTACTGAAACAAGTGGACCAGTTTTCAGATGGGCTAAGTATCCCCACAGGAAAGAACAGATATTCCAGACTGTTATCCATGTCACCAGATGTAAGAATGGCAAGAATAGCTTCGCTTGAGAACATGGCGGGCATATCTTCAGTTGCTTTAAAAGCCATGGCTTCACAACTTTTTGAGGCAGAAGAAAGGGAACGTACATTAAACAGCCGTGGACGTTGGAACCAGTTACGCTCAATGGGAGATGCAAAGAACGTGCTTCAGTATTTGTTTAATGCTGTGGCAGAAGCAAGGTGCCAATTGTGGGAAAAGAATATGGAAGTTAAGGACATGAAAGAGCAACTAAATGATCTTGTAATGTTACTACAACAAAGTGAAACACAGCGAAAAGAACTTGTGAAGGAGCAAAAAATGAAGGAACAGACTGTTGCCATTGCATTGTGTACATCTGCGCCGGCAAACTCGCGTTCACTGAAACACCTTGCGGATGAAATGAGCGGTCCATTGTCTCCCATGTCACTTCCTGCACCAAAGCAACTCAAATTCACCTCTGGAATTGTTAATGGGTTAGTCAGGGAGTCAGCTGCATTTTTAGATGAAACACGAAAGATGACACCCATTGGACAGTTATCAACAAAGAAGCTAGCAGCTGTAGGACAAGCTGGAAAACTCTGGAGGTGGAAAAGAAGTCATCATCAATGGCTGCTGCAATTCAAATGGAAATGGCAGAAGCCATGGAAACTCTCGGAATGGATCAAGCACAGTGATGAGACAATCATGAGGTCAAGGCCTCGAGCACTTGCATTGATTGATGTGATTCGCAGTTTGCAGGCATTGTATATTGCGAATGAGTTTCATGTCTTCGTCACTTTCGCCGAGATGTGGTTGGCTTGTTGGAGAAACTTCTCAGGGTTCTATGTGCAGGTTGTAACCACACATGGGAGGCTTATGCTGACATTGACAACACCGGAAAGAATCATCTTTAGAAGGTTGAAAGAAAAAACGTTGCACTACTCTGCATATATGGGGGAAGATATGGTTTGTGATGATGCTGTTCGAGTTTTTTTTTTTTCGATCAAAATTTGTAAATTGTCATCACCAACGGTGGGGAAGTCAGTTCTGTACAGATTCAACAATTCTCCAAATTGA 3399 0.4278 METSENCCVKVAVHIRPLIADERQQGCRECVSVTPGKPQVQIGSHSFTFDHVYGNGGSSSSAMFEECVIPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGYNDNCQNGVIPQVMNALFNKIETLKHQTEFQLQVSYIEILKEEVRDLLDTLSMGKSETSNGHSGKLTVPGRPSIQIRETSNGVITLAGSTEVSVSTLQEMAACLEQGSVNRATGSTNMNNQSSRSHAIFTITIEQMRKLHSVSPGSDTSDEDMGEEYLCAKLHLVDLAGSERAKRTGSDGLRLKEGIHINKGLLALGNVISALGDEKKRKDGVHIPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPVANRDLISNEMQQMRQQLKYLQAELSARGGPPADDVQVLKERIAWLEATNEDLCRELHEYRSRCAMDTQDGDICPVTDGLERGFQSLDSSDHQTAESLSGENSRETDEATKELEHALLQNTMDEEMRELNKRLEQKESEMKLIGGVETEALKQHFGKKIMELEEEKRKVQQERDRLLTEVENLAANSDGQAHKTQDICAQKLKTLEAQILDFKKKQENQVQLLKQKEKSEEAAKRLQAEIQYIKAQKVQLQHKMKQEAEQFRQWKASREKELLQLKKEGRRNEYERHKLEALNQRQKMVLQRKTEEAAMATKRLKELLEARKSSPRENSVNSNGHLQPGQINEKSLQRWLDHELEVMVNVHEVRAEFDKQNRVQAALEEELALLKQVDQFSDGLSIPTGKNRYSRLLSMSPDVRMARIASLENMAGISSVALKAMASQLFEAEERERTLNSRGRWNQLRSMGDAKNVLQYLFNAVAEARCQLWEKNMEVKDMKEQLNDLVMLLQQSETQRKELVKEQKMKEQTVAIALCTSAPANSRSLKHLADEMSGPLSPMSLPAPKQLKFTSGIVNGLVRESAAFLDETRKMTPIGQLSTKKLAAVGQAGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIMRSRPRALALIDVIRSLQALYIANEFHVFVTFAEMWLACWRNFSGFYVQVVTTHGRLMLTLTTPERIIFRRLKEKTLHYSAYMGEDMVCDDAVRVFFFSIKICKLSSPTVGKSVLYRFNNSPN 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1627 1132 Gene3D Kinesin motor domain 1 393 IPR036961 -
Glsi05g1627 1132 ProSiteProfiles Kinesin motor domain profile. 8 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g1627 1132 Coils Coil 729 749 - -
Glsi05g1627 1132 MobiDBLite consensus disorder prediction 453 478 - -
Glsi05g1627 1132 MobiDBLite consensus disorder prediction 693 709 - -
Glsi05g1627 1132 Pfam Kinesin motor domain 15 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g1627 1132 Coils Coil 521 555 - -
Glsi05g1627 1132 Coils Coil 669 689 - -
Glsi05g1627 1132 CDD KISc_KIF4 7 366 - -
Glsi05g1627 1132 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1013 IPR027640 GO:0003777|GO:0007018
Glsi05g1627 1132 MobiDBLite consensus disorder prediction 453 469 - -
Glsi05g1627 1132 Coils Coil 582 622 - -
Glsi05g1627 1132 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g1627 1132 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g1627 1132 PRINTS Kinesin heavy chain signature 261 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g1627 1132 PRINTS Kinesin heavy chain signature 315 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g1627 1132 MobiDBLite consensus disorder prediction 689 709 - -
Glsi05g1627 1132 FunFam kinesin-like protein KIN-4A isoform X1 2 393 - -
Glsi05g1627 1132 Coils Coil 844 892 - -
Glsi05g1627 1132 Coils Coil 373 393 - -
Glsi05g1627 1132 Coils Coil 405 425 - -
Glsi05g1627 1132 ProSitePatterns Kinesin motor domain signature. 260 271 IPR019821 GO:0003777|GO:0005524|GO:0007018
Glsi05g1627 1132 SMART kinesin_4 6 373 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g1627 1132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 396 IPR027417 -
Glsi05g1627 1132 Coils Coil 488 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1627 Glsi-ChrGlsi05 64576829 64588448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1627 9 411 Calmodulin-binding Proteins AT5G65930 34.398 8.47e-55 207