Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1612 ATGGGGTCAAGAAGGGTTGCACCTTCATTTCTACCTATTCATACTGGAGGTGAAACTGCATATCCTTTTTATAACCAAAGAAACATCATGCTTGGACCTCAAACTAGAAGGGGAATTTGGGTACATAATATAGCAAACTTGAGTTTTGCCAATGGAACTGCAAACTTCCTTGGAAATTTTGCTCACCCATCTCAATATGGTTCTTTTTCCGGTATTCATCTCTCAAATGCTCCTACATGGGTCCCTGGGTTCAACTTTTGCAAACAACATGGGCATATGTTTTCAAGAGTTGGGAACCATTCTGCAGTTGCACCTAATGGTTTCCCTGGGCAAAGTAGTCACAGTCCATCAGAGTTAGGTCCTTCAGCAGTCTCACAAGAAATGAACTTTTCTATTGTATTTCGTAATGCTAGATTCCAGAACCAGCATAGGACAGTGCCAAGATCTGAGGATCAATCTAGTGGCAATCCTGAACCTCCTTTTATGTCATGGTCTCCTGATACTGCTGAAGCTAGAAGCAGTTTGATGACTGAGGCATGCTTTGATACATACCTTTTTGAAGACAGTGGTTTAGGTTTGTGTTTTGCCTGGCCAATAGAAGGCCTGGTTCAAAATGCTTTGGAATATCTGCGTGATGGTGGATCCTTGCGGCTAGAGGAATTGTTGATCCTTGACTACTCACTTCTGTTATATTTGCTTGAGGAGCATATTAATCATGAGGACTCAGATCTTGATGAAGAGAACATGTCATATGAGGAGAATTGGCAATTCGAAACTGGATTGACTGAGGAAGCTATTCTGATGCACCTTAGGCAGGAAAAGTTCCAGTTCACCACAGCCAAGATTCCTGCAAATGATGAATCCTGTTGCATGTGTCTGGTGAGGAAGAATATGTCGATTGTGAGGACATCGGAGTGCTGGATTGCGGACACAGATTTCACTTCCATTGCATCAAACACTACTAATTCCCATGTGGAAGGAAAAATGCCTTTCCTTGGTCCACTTATCTTATCTTTCCCCAGTCCCGCACGCTCCTTTACAATGAGCGATGCGACTCACTCCGTTTTGCCTCGGTGCGAGTCAGAGTCAAAAGCTGCACGACACAAGACATTGGATAGAGCCAAGAGTGCTTCTATCATCTACTCACCGCCCTTGATCTTCCTCGCAGATCTCAACGCTGGATGCTACCAATAA 1194 0.4363 MGSRRVAPSFLPIHTGGETAYPFYNQRNIMLGPQTRRGIWVHNIANLSFANGTANFLGNFAHPSQYGSFSGIHLSNAPTWVPGFNFCKQHGHMFSRVGNHSAVAPNGFPGQSSHSPSELGPSAVSQEMNFSIVFRNARFQNQHRTVPRSEDQSSGNPEPPFMSWSPDTAEARSSLMTEACFDTYLFEDSGLGLCFAWPIEGLVQNALEYLRDGGSLRLEELLILDYSLLLYLLEEHINHEDSDLDEENMSYEENWQFETGLTEEAILMHLRQEKFQFTTAKIPANDESCCMCLVRKNMSIVRTSECWIADTDFTSIASNTTNSHVEGKMPFLGPLILSFPSPARSFTMSDATHSVLPRCESESKAARHKTLDRAKSASIIYSPPLIFLADLNAGCYQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1612 397 MobiDBLite consensus disorder prediction 143 167 - -
Glsi05g1612 397 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 51 293 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1612 Glsi-ChrGlsi05 64447329 64451626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1612 203 292 C3H Transcription Factor Family AT2G15530 31.000 1.16e-09 58.2