Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1604 ATGCCCGATCATTCCCCTCCAGCAATGAACGACCAGCTCTCCAAGCCCACTTCAATCTTCGGACTCCGCTTGTGGGTTATTTTAGGGGTATGTGTTGGAGCCGCCGTTGTGCTACTTCTCTTCCTCATCACTATCTGGCTCGCTTCTAAGCGCTCCAAGAGCAAGCCCTCTCACCGACCCTCCATCCCAGTTATCTCCAAAGAGATCCAAGAGATTAGAGTGGACCACGCCCGCACCCACGATTCCAAGCCAAATGGGACTCCTATCCAATCCGACCCATTTCCTGAACCAGACCCAGCTCCCGGAATCGAACGGCAAGCTCTGCTACCAACATCAGAGGAGGAGAACCCGTTGGTGTACAACAGAATTCAATTCGAGATTGGGAAGAATCATAGAATTTCATACCCTGAACGTGCCTTTGCCAGGTCCTCTTCACACGGAAGTGGGGAGGCTCGACCGGTCGATCAGGTGCCTAAGGTGATTCCTGAAGTTTCACATTTGGGTTGGGGCCACTGGTATACCCTTAGGGAGCTTGAGGATTCCACGAATGGCTTCGCCCACGAGAATGTTATCGGTGAAGGCGGCTATGGAATTGTCTACCACGGTATATTGAAGGACAACAATCATGTTGCTGTTAAGAATTTGCTCAACAATAGGGGACAAGCTGAGAAAGAGTTCAAGGTTGAAGTGGAAGCTATAGGACGAGTTCGGCATAAAAATTTAGTGAGGTTGCTCGGGTATTGTGCTGAAGGAGCTCATAGAATGCTTGTGTACGAGTACGTTGACAATGGGAACTTAGAGCAGTGGCTGCATGGGGACGTTGGGCCTAGCAGTCCTTTGACTTGGGAAATTCGAATGAACATTATTCTGGGAACAGCGAAAGGGTTAACTTACCTTCACGAGGGGCTGGAACCAAAAGTTGTTCACCGTGATATTAAATCAAGCAACATTTTGATTGACAAGCAGTGGAATTCAAAGGTGTCCGACTTTGGCCTTGCCAAACTCCTCGGCTCTGAGAGCAGCTACATTACAACCCGTGTCATGGGCACATTTGGATATGTAGCTCCTGAATATGCGAGTACTGGAATGTTGAATGAACGAAGTGATGTCTATAGTTTTGGAATTCTTATAATGGAAATAATTACCGGCAGGAACCCAGTTGATTACAATCGACCTCCAGAAGAGGTGAATTTAGTTGACTGGCTGAAGAAGATGGTTAATAACAGGAACGCAGAGGGAGTCTTGGATCCCAAGCTTCCTGAGAAACCAAGTTCAAGGGCACTAAAGCGAGCCCTTCTTGTAGCCTTGCGCTGCACAGACCCTAATGCACAGAAGCGGCCTAAAATGGGACATGTCATACATATGCTTGAAGCTGAGGATTCCCCTCACAAAGAGGAGCGTAGAGCTAAAAGGGATGCAGGCCATTCACCTAATGATAGAACAGAGGATGAATTAAAAGAGAAGGGGGCAACTGTATCTGGTGATGATTGAAATGGCACTCAGAAAGCCGAGTTTTGCCTTGGGATTGCCAATTTTCTAGGCGTGGAGAATAGATGATTGTGGCCTCAAGTCCGCATAGGAAAGGTCTTTTCTAAGCTGGTCCCAGGTCTCCCACAAGCCATGTGCTTATTGTAG 1635 0.4789 MPDHSPPAMNDQLSKPTSIFGLRLWVILGVCVGAAVVLLLFLITIWLASKRSKSKPSHRPSIPVISKEIQEIRVDHARTHDSKPNGTPIQSDPFPEPDPAPGIERQALLPTSEEENPLVYNRIQFEIGKNHRISYPERAFARSSSHGSGEARPVDQVPKVIPEVSHLGWGHWYTLRELEDSTNGFAHENVIGEGGYGIVYHGILKDNNHVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPSSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILIDKQWNSKVSDFGLAKLLGSESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYNRPPEEVNLVDWLKKMVNNRNAEGVLDPKLPEKPSSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPHKEERRAKRDAGHSPNDRTEDELKEKGATVSGDDXNGTQKAEFCLGIANFLGVENRXLWPQVRIGKVFSKLVPGLPQAMCLL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1604 544 ProSiteProfiles Protein kinase domain profile. 185 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1604 544 FunFam Probable serine/threonine-protein kinase At1g01540 165 260 - -
Glsi05g1604 544 Gene3D Phosphorylase Kinase; domain 1 163 260 - -
Glsi05g1604 544 CDD STKc_IRAK 191 457 - -
Glsi05g1604 544 MobiDBLite consensus disorder prediction 450 491 - -
Glsi05g1604 544 MobiDBLite consensus disorder prediction 443 497 - -
Glsi05g1604 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Glsi05g1604 544 PANTHER OS01G0323000 PROTEIN 8 476 - -
Glsi05g1604 544 Pfam Protein kinase domain 187 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1604 544 SUPERFAMILY Protein kinase-like (PK-like) 160 457 IPR011009 -
Glsi05g1604 544 SMART serkin_6 185 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g1604 544 FunFam Putative receptor-like serine/threonine-protein kinase 261 471 - -
Glsi05g1604 544 ProSitePatterns Protein kinases ATP-binding region signature. 191 213 IPR017441 GO:0005524
Glsi05g1604 544 Gene3D Transferase(Phosphotransferase) domain 1 261 482 - -
Glsi05g1604 544 MobiDBLite consensus disorder prediction 73 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1604 Glsi-ChrGlsi05 64376306 64379615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1604 162 459 Trihelix Transcription Factor Family AT1G70460 46.535 1.72e-86 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Glsi05g1604 Pkinase 2.2e-48 CL0016